PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3j3bG_

Fold library id	PDB Header	Molecule	Title
c3j3bG_	PDB header: ribosome	Chain: G: PDB Molecule: 60s ribosomal protein l7a;	PDBTitle: structure of the human 60s ribosomal proteins

Links to external resources
Added to library: Sat May 4 08:49:00 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K Q E A K K V V N P L F E K R P K N F G I G Q D I Q P K R D L T R F V K W P R Y I R L Q R Q R A I L Y K R L K V P P A I N Q F T Q A L D R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S
G G G
S S
T T S S S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T A T Q L L K L A H K Y R P E T K Q E K K Q R L L A R A E K K A A G K G D V P T K R P P V L R A G V N T V T T L V E N K K A Q L V V I A H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T S S
S
S S
B
T T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V D P I E L V V F L P A L C R K M G V P Y C I I K G K A R L G R L V H R K T C T T V A F T Q V N S E D K G A L A K L V E A I R T N Y N D R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T
S
T T T S S
S S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence D E I R R H W G G N V L G P K S V A R I A K L E K A K A K E L A T K L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	Q	E	A	K	K	V	V	N	P	L	F	E	K	R	P	K	N	F	G	I	G	Q	D	I	Q	P	K	R	D	L	T	R	F	V	K	W	P	R	Y	I	R	L	Q	R	Q	R	A	I	L	Y	K	R	L	K	V	P	P	A	I	N	Q	F	T	Q	A	L	D	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S								S	S	S		S								G	G	G					S															S				T	T	S	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	A	T	Q	L	L	K	L	A	H	K	Y	R	P	E	T	K	Q	E	K	K	Q	R	L	L	A	R	A	E	K	K	A	A	G	K	G	D	V	P	T	K	R	P	P	V	L	R	A	G	V	N	T	V	T	T	L	V	E	N	K	K	A	Q	L	V	V	I	A	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T					T																	S	S		S		S	S							B		T										T	T			S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	P	I	E	L	V	V	F	L	P	A	L	C	R	K	M	G	V	P	Y	C	I	I	K	G	K	A	R	L	G	R	L	V	H	R	K	T	C	T	T	V	A	F	T	Q	V	N	S	E	D	K	G	A	L	A	K	L	V	E	A	I	R	T	N	Y	N	D	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T													T	T							S								T	T	T	S	S			S					S																					T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	D	E	I	R	R	H	W	G	G	N	V	L	G	P	K	S	V	A	R	I	A	K	L	E	K	A	K	A	K	E	L	A	T	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T