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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j3bC_

Fold library idPDB HeaderMoleculeTitle
c3j3bC_PDB header: ribosomeChain: C: PDB Molecule: 60s ribosomal protein l4;PDBTitle: structure of the human 60s ribosomal proteins


Added to library: Sat May 4 08:48:45 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAV
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Known secondary structure (DSSP)




B


SSS


S
B



STTTS


TTTTTT






TT
TT





SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHR
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Known secondary structure (DSSP)

S



SSSS
S


SSTTSTT


SS


TTS






TTS
TS

 .........150.........160.........170.........180.........190.........200.........210
Sequence IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNE
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Known secondary structure (DSSP)
TT
S
SS
GGGGG

ST
T

SSSGGGTT







S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHK
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Known secondary structure (DSSP)
TTSTTSTT

TTT

SGGG
S


TTTTSS

BTTB

SSS
S





S
 .........290.........300.........310.........320.........330.........340.........350
Sequence MINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDK
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Known secondary structure (DSSP) SS
S
TTTTGGGT



S
S








TTS
S
T
 .........360........
Sequence AAAAAAALQAKSDEKAAV
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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