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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j39a_

Fold library idPDB HeaderMoleculeTitle
c3j39a_PDB header: ribosomeChain: A: PDB Molecule: 60s ribosomal protein l8;PDBTitle: structure of the d. melanogaster 60s ribosomal proteins


Added to library: Sat May 4 08:39:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSNIKRKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKF
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Known secondary structure (DSSP)


TTS
STTTTTTSTTTTS
TTT


S
TT
SSSTTTTTTSTTTSSS
SS





TT

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKK
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Known secondary structure (DSSP)

TTT
TTSS
TTSSSS

S


STTTT







SS

S
 .........
Sequence AGGVCLLSA
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Known secondary structure (DSSP) TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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