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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j39D_

Fold library idPDB HeaderMoleculeTitle
c3j39D_PDB header: ribosomeChain: D: PDB Molecule: 60s ribosomal protein l5;PDBTitle: structure of the d. melanogaster 60s ribosomal proteins


Added to library: Sat May 4 08:36:56 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCA
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Known secondary structure (DSSP)






STTTTTS

S


GGGTT



TT

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence AYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLD
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Known secondary structure (DSSP)
GGGGGGTT

S
TTSTS
SSS



TT










TTS



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEE
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Known secondary structure (DSSP)
TTS


TT
TTT
B



GGGSTTB
SSS

B
TTTTS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKIAAHKA
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Known secondary structure (DSSP) SSS
STTTT


STT












S
SSS
S




 .........290
Sequence AYVAKLQSET
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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