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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j39B_

Fold library idPDB HeaderMoleculeTitle
c3j39B_PDB header: ribosomeChain: B: PDB Molecule: 60s ribosomal protein l3;PDBTitle: structure of the d. melanogaster 60s ribosomal proteins


Added to library: Sat May 4 08:40:19 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKK
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Known secondary structure (DSSP)



SS



SS
GGGTT



S
SS


S





TTS


BS




TT
TTBT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDD
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Known secondary structure (DSSP)




SS

S


TTTTGGG
S
SSS



TTTTTGGGTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV
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Known secondary structure (DSSP) STTTTT
S

GGGS

TT



B

SSTBT

 .........220.........230.........240.........250.........260.........270.........280
Sequence FGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEI
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Known secondary structure (DSSP)

TT





S







TT
TT
SSS
S



SSS



TTS

S


S

 .........290.........300.........310.........320.........330.........340.........350
Sequence NKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKS
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Known secondary structure (DSSP)




SSS



SSS

TTT


S
S

TTSTTTT



S
S

SS
TT

 .........360.........370.........380.........390.........400.........410....
Sequence LLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAAAAATTT
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Known secondary structure (DSSP) SS



GGGS





S
TTTT


SSS
S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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