Fold library entry viewer: c3j38z_

Added to library: Sat May 4 09:01:42 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	T	V	D	E	I	R	G	L	M	D	K	K	R	N	I	R	N	M	S	V	I	A	H	V	D	H	G	K	S	T	L	T	D	S	L	V	S	K	A	G	I	I	A	G	A	T	R	F	T	D	T	R	K	D	E	Q	E	R	C	I	T	I	K	S	T	A	I	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										G	G	G										T	T	S	S														S	S			S	S			S	S		S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	F	E	V	E	E	K	D	L	V	F	I	T	H	P	D	Q	R	E	K	E	C	K	G	F	L	I	N	L	I	D	S	P	G	H	V	D	F	S	S	E	V	T	A	A	L	R	V	T	D	G	A	L	V	V	V	D	C	V	S	G	V	C	V	Q	T	E	T	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S					S	S													T	T	T												S								T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	Q	A	I	A	E	R	I	K	P	I	L	F	M	N	K	M	D	R	A	L	L	E	L	Q	L	D	A	E	E	L	Y	Q	T	F	Q	R	I	V	E	N	V	N	V	I	I	A	T	Y	N	D	D	G	G	P	M	G	E	V	R	V	D	P	S	K	G	S	V	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																T	T																										S	T	T	T	T	T	T							S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	S	G	L	H	G	W	A	F	T	L	K	Q	F	S	E	M	Y	S	E	K	F	K	I	D	V	V	K	L	M	N	R	L	W	G	E	N	F	F	N	A	K	T	K	K	W	Q	K	Q	K	E	A	D	N	K	R	S	F	C	M	Y	I	L	D	P	I	Y	K	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S		B													T	T	S											T	S	S	S					T	T	T					S				S	S								T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	A	I	M	N	Y	K	K	E	E	I	G	T	L	L	E	K	I	G	V	T	L	K	H	E	D	K	D	K	D	G	K	A	L	L	K	T	V	M	R	T	W	L	P	A	G	E	A	L	L	Q	M	I	A	I	H	L	P	S	P	V	V	A	Q	K	Y	R	M	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T					S	T	T			S															B												T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Y	E	G	P	H	D	D	E	A	A	I	A	V	K	S	C	D	P	D	G	P	L	M	M	Y	I	S	K	M	V	P	T	S	D	K	G	R	F	Y	A	F	G	R	V	F	A	G	K	V	A	T	G	Q	K	C	R	I	M	G	P	N	Y	T	P	G	K	K	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S	S									T		T	T	S													S			S	S										S				T	T								T	T			T	T			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	Y	E	K	A	I	Q	R	T	I	L	M	M	G	R	Y	V	E	A	I	E	D	V	P	S	G	N	I	C	G	L	V	G	V	D	Q	F	L	V	K	T	G	T	I	T	T	F	K	D	A	H	N	M	K	V	M	K	F	S	V	S	P	V	V	R	V	A	V	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T						S				T	T							S		T	T	T		S	S						S		T	T											S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	N	P	A	D	L	P	K	L	V	E	G	L	K	R	L	A	K	S	D	P	M	V	Q	C	I	I	E	E	S	G	E	H	I	I	A	G	A	G	E	L	H	L	E	I	C	L	K	D	L	E	E	D	H	A	C	I	P	L	K	K	S	D	P	V	V	S	Y	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T																	S	S							S	S	S							S	S														T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	V	S	E	E	S	D	Q	M	C	L	S	K	S	P	N	K	H	N	R	L	L	M	K	A	L	P	M	P	D	G	L	P	E	D	I	D	N	G	D	V	S	A	K	D	E	F	K	A	R	A	R	Y	L	S	E	K	Y	D	Y	D	V	T	E	A	R	K	I	W	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				S							T	T	S													T									T	S	S		S	S	S												T	T									T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	G	P	D	G	T	G	P	N	F	I	L	D	C	T	K	S	V	Q	Y	L	N	E	I	K	D	S	V	V	A	G	F	Q	W	A	S	K	E	G	I	L	A	D	E	N	L	R	G	V	R	F	N	I	Y	D	V	T	L	H	A	D	A	I	H	R	G	G	G	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	S	S											T	T																		S		T	T	T	S			B		S												S		S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	P	T	T	R	R	C	L	Y	A	A	A	I	T	A	K	P	R	L	M	E	P	V	Y	L	C	E	I	Q	C	P	E	V	A	V	G	G	I	Y	G	V	L	N	R	R	R	G	H	V	F	E	E	N	Q	V	V	G	T	P	M	F	V	V	K	A	Y	L	P	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T																	G	G	G											T	T		B							S	S	S	S	S										G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Sequence	E	S	F	G	F	T	A	D	L	R	S	N	T	G	G	Q	A	F	P	Q	C	V	F	D	H	W	Q	V	L	P	G	D	P	S	E	P	S	S	K	P	Y	A	I	V	Q	D	T	R	K	R	K	G	L	K	E	G	L	P	D	L	S	Q	Y	L	D	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		T	T										T	S																		T	T	S			S	S	S												T			S

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PDB structure

FASTA sequence

Hidden Markov model

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