PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3j32B_

Fold library id	PDB Header	Molecule	Title
c3j32B_	PDB header: oxygen transport	Chain: B: PDB Molecule: hemocyanin isoform 1;	PDBTitle: an asymmetric unit map from electron cryo-microscopy of haliotis2 diversicolor molluscan hemocyanin isoform 1 (hdh1)

Links to external resources
Added to library: Sat Apr 20 08:38:30 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D N V V R K D V S H L T V D E V Q A L H G A L H D V T A S T G P L S F E D I T S Y H A A P A S C D Y K G R K I A C C V H G M P S F P F W H R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S T T
T T
S T T S T S S S S
T T
S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A Y V V Q A E R A L L S Q R K T V G M P Y W D W T E T L T Q L P A L V T E P I F I D S L G G K T Q P N Y W H R G E I A F A N K A T A R A V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T S
S S
S
S
T T
S S
T T T S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D R L F E K V E T G H Y T K L M E S V L D A L E R D E F C K F E I Q F E L A H N A I H Y L V G G K Y E Y S M S N L D Y T A Y D P I F F L H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S S S
S T
S S
S
S S S T T
T T T T T T S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S N V D R I F A I W Q R L Q E L R G K N P K A I D C A H E L A R Q E L E P F N R D T N P V P I T K Q H S R P V D L F D Y H Q L G Y S Y D S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S T T T S
T T T T S S
S
T
S T T G G G
G G G G T
B S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence N L N G M T P E E L K I K L D E R H S K E R A F A S F R L K G F G G S A N V V V Y A C L P D S D P R S D D H C E K A G D F F V L G G S T E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T S
B
S S
T T T
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence P W V F Y R P Y F F D V T K A V Q R L G V A L S G H Y Y V K T E L F S V N G T S L S P D I L P Q P T V A Y R P G K G H I D P P V H H R Q N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
T T T
T T S
T T S
B
G G G S
S
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence D Y I V R K N I D H L T R S E T Y E L R K A M E R F Q A D T S V D G F Q A T V E Y H G L P A R C P E P D A K V R F A C C M H G M A S F P H W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
B G G G
T
S S S S S S S
S S
S S
S S
B
T T
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence H R L F V T Q V E D A L V R R G P P I G V P Y W D W T K P M T H L P D L A A S E D Y V D P N G H T R H N P F F N A N I S F E E E H H H T S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
B
T T S
S
S S
T T T
T T T
T T T T
B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence S I D A R L F A P A A Y G D H T A L F D G I L Y A F E Q E D F C D F E I Q F E L V H N S I H A W I G G S E D Y S M S T L H Y A A F D P I F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S S S
T
S
B
S
S S S T T S T T S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence L H H S N V D R L W A I W Q A L Q I R R Q K P Y R A H C A Q S I E Q L P M K P F A F P S P L N N N E K T H S N S V P T D I Y D Y E E T L H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T
S S S S
T T T S S
S S
S S G G G G G T T T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence S Y D D L T F G G M N L D E I E E T I H H R Q Q H E R V F A G S L F G G I G K S A L V N I F I N K P G S S P H K A G D I A I L G G T K E M P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S
B T T B
T S
S S S
S S S
B
S S B

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence W A F D R L Y K V E I T D A L K A L A L D V D G D Y E V T F D I H D M H G N K L S S D L I P H P A V I S E P A H P S F E D V T T S L R I R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B
T T
S S
S
S S S
T T S S
S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence N V D Y L T P E E T N D L R H A L D L L E K D P S A G G F D Q L G A F H G E P K W C P N P E A E H K V A C C V H G M A V F P H W H R L L A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B G G G
S
S S S S T G G G G G T T T S S
T T T
S S
S S
B
S S T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence Q A E N A L R R H G Y S G A F P Y W D W T H P I S K L P D L V T P E T Y T D P S D N Q D K H N P W Y N G H I E T V D Q D T T R N V R G D L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
B
T T S
S S
T T T S
S S
S S
S
G G G
T T T T
B
S
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Q Q P E F G H S T D I A P Q V L L A L E Q D D F C S F E V Q Y E I S H N F I H A L V G G T T P Y G M A S L R Y T A Y D P I F F L H H S N T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B S S S S
B S S S
S S B
S
S S S S S S T T G G G G
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence R I W A I W Q A L Q K Y R G K P Y N T A N C A I A S M R K P L Q P F G L S S D V N P D I I T R E H A I P F D V F N Y R G N F H Y K Y D T L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S S S
S
S S S
T
S T
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence F N G L S I S Q L N R E L D K I K S H D R V F A G F L L S G I K K S V L V K F N V C A P P H D C H P A G E F Y L L G D E N E M A W A Y D R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T S
S S
T T S
T T B
S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence F K Y D T T N V L D E N N L H F Y D H I F I T Y E V F D L H G T S L G T D I F H K A N V I H D S G T G S R E H D R Y V E E V T G A S H I R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
T T S
B T T T B
G G G S
S
S S S
S
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence N L N D L N L G E M E S L R A A F L H I Q N D G T Y E S I A Q Y H G K P G K C E L N H R S I A C C V R G M P T F P Q W H R L Y V A Q V E N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S T T
T S T T T S T T
S
S S S
S S T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence L L K M G S S V A V P Y W E W T A P I D H L P G L I D D A T Y F N S R Q Q R Y D P N P F F R G K I S F E N A V T T R D P Q E E L F N S E Y M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
B
T T S
S S
T T T T
S S S S S
T T S
B T T T T B
B
S S S S
S S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence Q N N V L L A L E Q D N Y C D F E I Q F E L V H N A L H S L L G G K G Q Y S M S S L D Y S A F D P V F F L H H A N T D R L W A I W Q E L Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S B
S
T T S T T
T T T G G G S T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence Y R G L P Y E E A N C A I N L M H Q P L M P F S D P N E N H G N V T L K H S K P Q D C F D Y R N N F G Y K Y D N L E F H H L S I P S L D A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
S S S T S
T T T S
B T T B
T
S T
S
T T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence L K A R K E H D R V F A G F L L H N I G T S A D I S I Y I C L P D G S G G N D C S H K A G T F Y V L G G E T E M P F V F D R L Y K F E I T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B
S S
T T
S S S
T T
T T
B
S S
T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence A L H K L G V K L H G G L F D L E L D I V A Y N G S H L D S H I F D P T I I F E P G I D T H V L D H D N T E E I L V R K N I I D L S P R E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T S
T T
S
S S
S S
B S S S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence V S L V K A L K G M Q N D R S A D G Y Q A I A S F H A L P P L C P N P S A A N R F A C C V H G M A T F P Q W H R L Y T V Q F Q D A L R R H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T S S S S
T T
T T
S S
S S T T T T

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence S L V G I P Y W D W T K P V S E L P K L L S A E T F H D P I H N V N V S N P F F K A D I E F E G D G V H T E R D I Q P D F L F H S G D H E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B
T T S
S S
T T T S
S
S S
S
T T T
B
T T S
B
G G G S
S S S S S S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence Y H N W F F E T V L L A L E Q E D Y C D F E I Q F E I A H N G I H T W I G G S A K Y G M G H L H Y A S Y D P I F Y I R H S Q T D R I W A I W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
S S S
T T S S S
T T T G G G

. . . . . . . . . 1900 . . . . . . . . . 1910 . . . . . . . . . 1920 . . . . . . . . . 1930 . . . . . . . . . 1940 . . . . . . . . . 1950 . . . . . . . . . 1960

Sequence Q E L Q K Y R G L S G S E A N C A I E L M R T P L K P F S F G A P Y N L N S H T Q E F S K P E D T F D Y K K F G Y R Y D N L E L E G R S V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S T S
S S T T S B T T T B
T
S G G G G S
G G G G S
S
B T T B

. . . . . . . . . 1970 . . . . . . . . . 1980 . . . . . . . . . 1990 . . . . . . . . . 2000 . . . . . . . . . 2010 . . . . . . . . . 2020 . . . . . . . . . 2030

Sequence H I D E L I K E R Q E H D G T F A G F L L K G F G T S A T V T L K I C R D D Y T C E N A G Y F T V L G G S A E M P W A F D R L Y K Y D I T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B B
S S S S S S
T T S
S S
T

. . . . . . . . . 2040 . . . . . . . . . 2050 . . . . . . . . . 2060 . . . . . . . . . 2070 . . . . . . . . . 2080 . . . . . . . . . 2090 . . . . . . . . . 2100

Sequence T L D H M N L R H E D T F Y I N G T V T A Y D G T V L P G D L I P P A S I I F V P G R H N L N S R K H T P N K I R H E L T S L S S R D V A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
S S S
B
G G G S
B
B
S S
S S S
B
B T T T

. . . . . . . . . 2110 . . . . . . . . . 2120 . . . . . . . . . 2130 . . . . . . . . . 2140 . . . . . . . . . 2150 . . . . . . . . . 2160 . . . . . . . . . 2170

Sequence L K A A L T S L Q K D D G P N G Y Q A I A A F H G L P A Q C H D T S G H Q I A C C I H G M A T F P H W H R L Y T L Q L E W A L A K H G S S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
T T S S S
T T
S
S
S S T T T T
S S

. . . . . . . . . 2180 . . . . . . . . . 2190 . . . . . . . . . 2200 . . . . . . . . . 2210 . . . . . . . . . 2220 . . . . . . . . . 2230 . . . . . . . . . 2240

Sequence A V P Y W D W T R P I T E L P H I L T D G E Y Y D F W Q D A V M P N P F S R G H V K F E N T F T V R N V R K A L F K L S P I G K H S V L F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
S S
G G G S
S S
S
S S S
S
T T S
T T T T
S S S
S
S
S
S S

. . . . . . . . . 2250 . . . . . . . . . 2260 . . . . . . . . . 2270 . . . . . . . . . 2280 . . . . . . . . . 2290 . . . . . . . . . 2300 . . . . . . . . . 2310

Sequence Q A L L A L E Q T D Y C D F E V Q F E V M H N T I H Y L I G G R Q T Y A F S S L H Y A S Y D P I F F I H H S F V D K I W A I W E E L Q S R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T S
S
S S S S S S T T T G G G S T

. . . . . . . . . 2320 . . . . . . . . . 2330 . . . . . . . . . 2340 . . . . . . . . . 2350 . . . . . . . . . 2360 . . . . . . . . . 2370 . . . . . . . . . 2380

Sequence H L Q F N G A D C A V S L M S K A M R P F N K D F N H N P F T K K H A V P N T L F D Y E D L G Y N Y D N L E I S G L N L K E I E A L I A K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
S S
S
T T T T S S S
S T
T
B S
S S S

. . . . . . . . . 2390 . . . . . . . . . 2400 . . . . . . . . . 2410 . . . . . . . . . 2420 . . . . . . . . . 2430 . . . . . . . . . 2440 . . . . . . . . . 2450

Sequence K S H A R V F A G F L L F G I G T S A D I H L D I C K T S D G C H H A G V L F I L G G S A E M H W A Y N R L Y K Y D I T E A L H E F G I N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B
S S
S S
B
T T
B
S S
B
T T
T

. . . . . . . . . 2460 . . . . . . . . . 2470 . . . . . . . . . 2480 . . . . . . . . . 2490 . . . . . . . . . 2500 . . . . . . . . . 2510 . . . . . . . . . 2520

Sequence E D V F H A D E A F F L K V S V V A V D G T V L P P S L L H E P T I L Y E P G V G H H E D H E S G S L A G S G V R K D V N T L T T A E T E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B
S S S S S S
T T S
B
G G G S
S
B
B S S S

. . . . . . . . . 2530 . . . . . . . . . 2540 . . . . . . . . . 2550 . . . . . . . . . 2560 . . . . . . . . . 2570 . . . . . . . . . 2580 . . . . . . . . . 2590

Sequence L R K A L R G V K E D H G Y N G F Q A I A A F H G K P A M C P M A D G H N L S C C T H G M A T F P H W H R L Y T K Q M E G A L K A H G S H V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S T T
B
T T S
B
S
S S T T T T
S S

. . . . . . . . . 2600 . . . . . . . . . 2610 . . . . . . . . . 2620 . . . . . . . . . 2630 . . . . . . . . . 2640 . . . . . . . . . 2650 . . . . . . . . . 2660

Sequence G L P Y W D W T A A F S H L P T L V T D N D N N P F H D G T I E Y L N V T T T R S P R D L L F N D P E H G S E S F F Y R Q V L F A L E Q T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S
S S
G G G T
S S
G G G
B T T T T B
B
T T T T
T T T
T
S

. . . . . . . . . 2670 . . . . . . . . . 2680 . . . . . . . . . 2690 . . . . . . . . . 2700 . . . . . . . . . 2710 . . . . . . . . . 2720 . . . . . . . . . 2730

Sequence F C K L E V Q F E I T H N A I H S W T G G H S P Y G M S T L D F T A Y D P L F W L H H S N T D R I W A I W Q A L Q K Y R G L P Y N H A N C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T
S S S T T
S S S G G G S T T
S S
S S S

. . . . . . . . . 2740 . . . . . . . . . 2750 . . . . . . . . . 2760 . . . . . . . . . 2770 . . . . . . . . . 2780 . . . . . . . . . 2790 . . . . . . . . . 2800

Sequence I Q A M K T P L R P F S D N I N H N P V T K A N S R P V D V F E Y N R L R Y Q Y D N L V F H G H T I P E L D H M L E E R K K H D R I F A A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G S
T T T S S T T
T
S G G G T S
T
B S
B T T B
T S

. . . . . . . . . 2810 . . . . . . . . . 2820 . . . . . . . . . 2830 . . . . . . . . . 2840 . . . . . . . . . 2850 . . . . . . . . . 2860 . . . . . . . . . 2870

Sequence L L S G I K K S A D V V F E I C E P N H E C V F A G T F A I L G G E L E M P W S F D R L F R Y D I T K V M Q Q Q H L R H D S D F S F K V K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
T T S
T T
B
S S
B
T T
T T S

. . . . . . . . . 2880 . . . . . . . . . 2890 . . . . . . . . . 2900 . . . . . . . . . 2910 . . . . . . . . . 2920 . . . . . . . . . 2930 . . . . . . . . . 2940

Sequence V G T D D I E L P P G I L K E P T I E F E P A L G D G L K H E D E G H D D R L S H V L I R K E V D L L S L K E A N A I K D A L Y K L Q N D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
T T S S
S
S
S
S
S S
S
B S T T

. . . . . . . . . 2950 . . . . . . . . . 2960 . . . . . . . . . 2970 . . . . . . . . . 2980 . . . . . . . . . 2990 . . . . . . . . . 3000 . . . . . . . . . 3010

Sequence S K G G F E E I A G Y H G Y P N K C P E K G D D K Y P C C V H G M P I F P H W R R L H T I Q M E R A L K N H G S Q I G I P Y W N W T K R M S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S S S S
T T S
S
S S T T T T
S S
B
T T S
S

. . . . . . . . . 3020 . . . . . . . . . 3030 . . . . . . . . . 3040 . . . . . . . . . 3050 . . . . . . . . . 3060 . . . . . . . . . 3070 . . . . . . . . . 3080

Sequence S I P A F F G D D S N N N P F Y K Y H I R A V N Q Y T T R D V D V E L F N Q T K F G E Y D Y L Y Y S T L Q V L E E N S F C G F E V Q Y E I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S
S T T
S S S
S S S
S
S S
S
S S
T
S

. . . . . . . . . 3090 . . . . . . . . . 3100 . . . . . . . . . 3110 . . . . . . . . . 3120 . . . . . . . . . 3130 . . . . . . . . . 3140 . . . . . . . . . 3150

Sequence H S A V H A W L G G A G K Y S M S T L E Y S A Y D P V F M I H H S S L D R I W I L W Q Q L Q K R R M K L Y Y A A D C A G D L M K F P M H P F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T S T T S T T T G G G S T T S
T T S
S S S T S
T T T

. . . . . . . . . 3160 . . . . . . . . . 3170 . . . . . . . . . 3180 . . . . . . . . . 3190 . . . . . . . . . 3200 . . . . . . . . . 3210 . . . . . . . . . 3220

Sequence S Y K S E N E D E F T R V N S V P N I V F D H Y K F N Y D Y D N M R I R G H D I N E L E A I I N E L R N K D R I F A G F V L S G I R I T A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
T
T
G G G G T
S
B T T B
T S
B
S S

. . . . . . . . . 3230 . . . . . . . . . 3240 . . . . . . . . . 3250 . . . . . . . . . 3260 . . . . . . . . . 3270 . . . . . . . . . 3280 . . . . . . . . . 3290

Sequence V K V F I H G T G A T D H E E F A G K F A I L G G E K E M P W A Y E R L L K L D I T D A V H H L H L K D E E I R F R M E V T A Y N G V P V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T T B
T T
B
T T
B
S S
T T
S S
S S S

. . . . . . . . . 3300 . . .

Sequence T K L A D P L I A H R P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	N	V	V	R	K	D	V	S	H	L	T	V	D	E	V	Q	A	L	H	G	A	L	H	D	V	T	A	S	T	G	P	L	S	F	E	D	I	T	S	Y	H	A	A	P	A	S	C	D	Y	K	G	R	K	I	A	C	C	V	H	G	M	P	S	F	P	F	W	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			S	T	T																	T	T			S	T	T	S							T	S	S	S	S						T	T						S			S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Y	V	V	Q	A	E	R	A	L	L	S	Q	R	K	T	V	G	M	P	Y	W	D	W	T	E	T	L	T	Q	L	P	A	L	V	T	E	P	I	F	I	D	S	L	G	G	K	T	Q	P	N	Y	W	H	R	G	E	I	A	F	A	N	K	A	T	A	R	A	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T			S							T	T	S			S	S							S		S				T	T		S	S					T	T	T	S				T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	R	L	F	E	K	V	E	T	G	H	Y	T	K	L	M	E	S	V	L	D	A	L	E	R	D	E	F	C	K	F	E	I	Q	F	E	L	A	H	N	A	I	H	Y	L	V	G	G	K	Y	E	Y	S	M	S	N	L	D	Y	T	A	Y	D	P	I	F	F	L	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S					S	S	S			S										T			S																				S		S		S	S	S	T	T		T	T	T	T	T	T	S	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	N	V	D	R	I	F	A	I	W	Q	R	L	Q	E	L	R	G	K	N	P	K	A	I	D	C	A	H	E	L	A	R	Q	E	L	E	P	F	N	R	D	T	N	P	V	P	I	T	K	Q	H	S	R	P	V	D	L	F	D	Y	H	Q	L	G	Y	S	Y	D	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S			T	T			S	T	T					T	S			T	T	T	T	S	S			S							T		S	T	T	G	G	G		G	G	G	G	T			B	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	L	N	G	M	T	P	E	E	L	K	I	K	L	D	E	R	H	S	K	E	R	A	F	A	S	F	R	L	K	G	F	G	G	S	A	N	V	V	V	Y	A	C	L	P	D	S	D	P	R	S	D	D	H	C	E	K	A	G	D	F	F	V	L	G	G	S	T	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S															T	S										B			S	S															T	T	T																T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	W	V	F	Y	R	P	Y	F	F	D	V	T	K	A	V	Q	R	L	G	V	A	L	S	G	H	Y	Y	V	K	T	E	L	F	S	V	N	G	T	S	L	S	P	D	I	L	P	Q	P	T	V	A	Y	R	P	G	K	G	H	I	D	P	P	V	H	H	R	Q	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S						T							T	T			T	T	S											T	T	S		B			G	G	G	S														S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	Y	I	V	R	K	N	I	D	H	L	T	R	S	E	T	Y	E	L	R	K	A	M	E	R	F	Q	A	D	T	S	V	D	G	F	Q	A	T	V	E	Y	H	G	L	P	A	R	C	P	E	P	D	A	K	V	R	F	A	C	C	M	H	G	M	A	S	F	P	H	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B		B	G	G	G																		T			S	S	S	S									S	S	S			S	S		S	S		S	S			B				T	T		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	R	L	F	V	T	Q	V	E	D	A	L	V	R	R	G	P	P	I	G	V	P	Y	W	D	W	T	K	P	M	T	H	L	P	D	L	A	A	S	E	D	Y	V	D	P	N	G	H	T	R	H	N	P	F	F	N	A	N	I	S	F	E	E	E	H	H	H	T	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T			S	S	S			B			T	T	S				S								S	S				T	T	T						T	T	T					T	T	T	T						B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	I	D	A	R	L	F	A	P	A	A	Y	G	D	H	T	A	L	F	D	G	I	L	Y	A	F	E	Q	E	D	F	C	D	F	E	I	Q	F	E	L	V	H	N	S	I	H	A	W	I	G	G	S	E	D	Y	S	M	S	T	L	H	Y	A	A	F	D	P	I	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S				S	S	S	S													T		S																					B		S		S	S	S	T	T	S					T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	H	H	S	N	V	D	R	L	W	A	I	W	Q	A	L	Q	I	R	R	Q	K	P	Y	R	A	H	C	A	Q	S	I	E	Q	L	P	M	K	P	F	A	F	P	S	P	L	N	N	N	E	K	T	H	S	N	S	V	P	T	D	I	Y	D	Y	E	E	T	L	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T	T	S		T	T				S	S					S	S			T	T	T	S	S			S	S											S	S	G	G	G	G	G	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	Y	D	D	L	T	F	G	G	M	N	L	D	E	I	E	E	T	I	H	H	R	Q	Q	H	E	R	V	F	A	G	S	L	F	G	G	I	G	K	S	A	L	V	N	I	F	I	N	K	P	G	S	S	P	H	K	A	G	D	I	A	I	L	G	G	T	K	E	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S				B	T	T	B														T	S													S	S	S										S	S	S			B											S	S	B
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	W	A	F	D	R	L	Y	K	V	E	I	T	D	A	L	K	A	L	A	L	D	V	D	G	D	Y	E	V	T	F	D	I	H	D	M	H	G	N	K	L	S	S	D	L	I	P	H	P	A	V	I	S	E	P	A	H	P	S	F	E	D	V	T	T	S	L	R	I	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				B		T								T			S	S		S										S	S	S					T	T	S	S																				S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	N	V	D	Y	L	T	P	E	E	T	N	D	L	R	H	A	L	D	L	L	E	K	D	P	S	A	G	G	F	D	Q	L	G	A	F	H	G	E	P	K	W	C	P	N	P	E	A	E	H	K	V	A	C	C	V	H	G	M	A	V	F	P	H	W	H	R	L	L	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	G	G	G			S																		S	S	S	S	T	G	G	G	G	G	T	T	T	S	S		T	T	T		S	S		S	S			B					S	S	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	Q	A	E	N	A	L	R	R	H	G	Y	S	G	A	F	P	Y	W	D	W	T	H	P	I	S	K	L	P	D	L	V	T	P	E	T	Y	T	D	P	S	D	N	Q	D	K	H	N	P	W	Y	N	G	H	I	E	T	V	D	Q	D	T	T	R	N	V	R	G	D	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S	S				B			T	T	S			S	S			T	T	T	S		S	S				S	S			S					G	G	G					T	T	T	T						B			S			S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Q	Q	P	E	F	G	H	S	T	D	I	A	P	Q	V	L	L	A	L	E	Q	D	D	F	C	S	F	E	V	Q	Y	E	I	S	H	N	F	I	H	A	L	V	G	G	T	T	P	Y	G	M	A	S	L	R	Y	T	A	Y	D	P	I	F	F	L	H	H	S	N	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B	S	S	S	S		B	S	S									S		S	S																				B		S		S	S	S	S	S	S	T	T	G	G	G	G		S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	R	I	W	A	I	W	Q	A	L	Q	K	Y	R	G	K	P	Y	N	T	A	N	C	A	I	A	S	M	R	K	P	L	Q	P	F	G	L	S	S	D	V	N	P	D	I	I	T	R	E	H	A	I	P	F	D	V	F	N	Y	R	G	N	F	H	Y	K	Y	D	T	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S		S	S				S	S						S							S		S	S	S									T		S					T											S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	F	N	G	L	S	I	S	Q	L	N	R	E	L	D	K	I	K	S	H	D	R	V	F	A	G	F	L	L	S	G	I	K	K	S	V	L	V	K	F	N	V	C	A	P	P	H	D	C	H	P	A	G	E	F	Y	L	L	G	D	E	N	E	M	A	W	A	Y	D	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S															T	S													S	S											T	T	S														T	T	B						S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	F	K	Y	D	T	T	N	V	L	D	E	N	N	L	H	F	Y	D	H	I	F	I	T	Y	E	V	F	D	L	H	G	T	S	L	G	T	D	I	F	H	K	A	N	V	I	H	D	S	G	T	G	S	R	E	H	D	R	Y	V	E	E	V	T	G	A	S	H	I	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	T								T			T	T	S										B	T	T	T	B				G	G	G	S											S				S	S	S				S						S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	N	L	N	D	L	N	L	G	E	M	E	S	L	R	A	A	F	L	H	I	Q	N	D	G	T	Y	E	S	I	A	Q	Y	H	G	K	P	G	K	C	E	L	N	H	R	S	I	A	C	C	V	R	G	M	P	T	F	P	Q	W	H	R	L	Y	V	A	Q	V	E	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	T	T																		T	S	T								T	T	S	T	T		S				S	S	S								S	S	T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	L	L	K	M	G	S	S	V	A	V	P	Y	W	E	W	T	A	P	I	D	H	L	P	G	L	I	D	D	A	T	Y	F	N	S	R	Q	Q	R	Y	D	P	N	P	F	F	R	G	K	I	S	F	E	N	A	V	T	T	R	D	P	Q	E	E	L	F	N	S	E	Y	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S	S				B			T	T	S			S	S			T	T	T	T							S	S	S	S	S					T	T	S				B	T	T	T	T	B					B			S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	Q	N	N	V	L	L	A	L	E	Q	D	N	Y	C	D	F	E	I	Q	F	E	L	V	H	N	A	L	H	S	L	L	G	G	K	G	Q	Y	S	M	S	S	L	D	Y	S	A	F	D	P	V	F	F	L	H	H	A	N	T	D	R	L	W	A	I	W	Q	E	L	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T			S																				B		S		T	T	S	T	T		T	T	T	G	G	G	S	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	Y	R	G	L	P	Y	E	E	A	N	C	A	I	N	L	M	H	Q	P	L	M	P	F	S	D	P	N	E	N	H	G	N	V	T	L	K	H	S	K	P	Q	D	C	F	D	Y	R	N	N	F	G	Y	K	Y	D	N	L	E	F	H	H	L	S	I	P	S	L	D	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S			S	S		S	S	S					T	S			T	T	T	S		B	T	T	B								T		S					T											S				T	T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	L	K	A	R	K	E	H	D	R	V	F	A	G	F	L	L	H	N	I	G	T	S	A	D	I	S	I	Y	I	C	L	P	D	G	S	G	G	N	D	C	S	H	K	A	G	T	F	Y	V	L	G	G	E	T	E	M	P	F	V	F	D	R	L	Y	K	F	E	I	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S										B			S	S											T	T			S	S	S		T	T												T	T					B		S	S						T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	A	L	H	K	L	G	V	K	L	H	G	G	L	F	D	L	E	L	D	I	V	A	Y	N	G	S	H	L	D	S	H	I	F	D	P	T	I	I	F	E	P	G	I	D	T	H	V	L	D	H	D	N	T	E	E	I	L	V	R	K	N	I	I	D	L	S	P	R	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			S	S													T	T	S					T	T																			S		S	S		S	S					B	S	S	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	V	S	L	V	K	A	L	K	G	M	Q	N	D	R	S	A	D	G	Y	Q	A	I	A	S	F	H	A	L	P	P	L	C	P	N	P	S	A	A	N	R	F	A	C	C	V	H	G	M	A	T	F	P	Q	W	H	R	L	Y	T	V	Q	F	Q	D	A	L	R	R	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	T	T	S						T	T	S	S	S	S			T	T		T	T		S	S								S	S	T	T																			T	T
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	S	L	V	G	I	P	Y	W	D	W	T	K	P	V	S	E	L	P	K	L	L	S	A	E	T	F	H	D	P	I	H	N	V	N	V	S	N	P	F	F	K	A	D	I	E	F	E	G	D	G	V	H	T	E	R	D	I	Q	P	D	F	L	F	H	S	G	D	H	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			B			T	T	S			S	S			T	T	T	S		S					S	S		S						T	T	T			B		T	T	S			B								G	G	G	S				S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	Y	H	N	W	F	F	E	T	V	L	L	A	L	E	Q	E	D	Y	C	D	F	E	I	Q	F	E	I	A	H	N	G	I	H	T	W	I	G	G	S	A	K	Y	G	M	G	H	L	H	Y	A	S	Y	D	P	I	F	Y	I	R	H	S	Q	T	D	R	I	W	A	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T																							S	S	S		T	T	S	S	S		T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960
Sequence	Q	E	L	Q	K	Y	R	G	L	S	G	S	E	A	N	C	A	I	E	L	M	R	T	P	L	K	P	F	S	F	G	A	P	Y	N	L	N	S	H	T	Q	E	F	S	K	P	E	D	T	F	D	Y	K	K	F	G	Y	R	Y	D	N	L	E	L	E	G	R	S	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		T	T				S	S					T	S			S	S	T	T	S	B	T	T	T	B								T		S	G	G	G	G	S		G	G	G	G	S				S				B	T	T	B
	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030
Sequence	H	I	D	E	L	I	K	E	R	Q	E	H	D	G	T	F	A	G	F	L	L	K	G	F	G	T	S	A	T	V	T	L	K	I	C	R	D	D	Y	T	C	E	N	A	G	Y	F	T	V	L	G	G	S	A	E	M	P	W	A	F	D	R	L	Y	K	Y	D	I	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	S			B			B							S	S	S										S	S	S														T	T	S						S	S						T
	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100
Sequence	T	L	D	H	M	N	L	R	H	E	D	T	F	Y	I	N	G	T	V	T	A	Y	D	G	T	V	L	P	G	D	L	I	P	P	A	S	I	I	F	V	P	G	R	H	N	L	N	S	R	K	H	T	P	N	K	I	R	H	E	L	T	S	L	S	S	R	D	V	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			T	T	S											S	S	S		B			G	G	G	S				B			B							S	S						S	S	S		B		B	T	T	T
	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170
Sequence	L	K	A	A	L	T	S	L	Q	K	D	D	G	P	N	G	Y	Q	A	I	A	A	F	H	G	L	P	A	Q	C	H	D	T	S	G	H	Q	I	A	C	C	I	H	G	M	A	T	F	P	H	W	H	R	L	Y	T	L	Q	L	E	W	A	L	A	K	H	G	S	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S	S	S								T	T	S	S	S						T	T		S					S			S	S	T	T																			T	T		S	S
	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240
Sequence	A	V	P	Y	W	D	W	T	R	P	I	T	E	L	P	H	I	L	T	D	G	E	Y	Y	D	F	W	Q	D	A	V	M	P	N	P	F	S	R	G	H	V	K	F	E	N	T	F	T	V	R	N	V	R	K	A	L	F	K	L	S	P	I	G	K	H	S	V	L	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B				S	S			S	S			G	G	G	S			S	S		S			S	S	S		S				T	T	S				T	T	T	T									S	S	S		S		S		S		S	S
	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310
Sequence	Q	A	L	L	A	L	E	Q	T	D	Y	C	D	F	E	V	Q	F	E	V	M	H	N	T	I	H	Y	L	I	G	G	R	Q	T	Y	A	F	S	S	L	H	Y	A	S	Y	D	P	I	F	F	I	H	H	S	F	V	D	K	I	W	A	I	W	E	E	L	Q	S	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			S														T						S		S		S	S	S	S	S	S	T	T	T	G	G	G	S	T
	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380
Sequence	H	L	Q	F	N	G	A	D	C	A	V	S	L	M	S	K	A	M	R	P	F	N	K	D	F	N	H	N	P	F	T	K	K	H	A	V	P	N	T	L	F	D	Y	E	D	L	G	Y	N	Y	D	N	L	E	I	S	G	L	N	L	K	E	I	E	A	L	I	A	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T	S		S	S							S			T	T	T	T	S	S	S											S					T						T			B	S				S	S	S
	.	.	.	.	.	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450
Sequence	K	S	H	A	R	V	F	A	G	F	L	L	F	G	I	G	T	S	A	D	I	H	L	D	I	C	K	T	S	D	G	C	H	H	A	G	V	L	F	I	L	G	G	S	A	E	M	H	W	A	Y	N	R	L	Y	K	Y	D	I	T	E	A	L	H	E	F	G	I	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										B			S	S											S	S											B				T	T					B		S	S				B		T								T			T
	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.	.	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520
Sequence	E	D	V	F	H	A	D	E	A	F	F	L	K	V	S	V	V	A	V	D	G	T	V	L	P	P	S	L	L	H	E	P	T	I	L	Y	E	P	G	V	G	H	H	E	D	H	E	S	G	S	L	A	G	S	G	V	R	K	D	V	N	T	L	T	T	A	E	T	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			B			S	S	S	S	S	S						T	T	S		B			G	G	G	S										S																		B		B	S	S	S
	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.	.	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.	.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.	.	.	.	.	.	.	.	.	2590
Sequence	L	R	K	A	L	R	G	V	K	E	D	H	G	Y	N	G	F	Q	A	I	A	A	F	H	G	K	P	A	M	C	P	M	A	D	G	H	N	L	S	C	C	T	H	G	M	A	T	F	P	H	W	H	R	L	Y	T	K	Q	M	E	G	A	L	K	A	H	G	S	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S	S										S	T	T			B			T	T	S			B			S			S	S	T	T																			T	T		S	S
	.	.	.	.	.	.	.	.	.	2600	.	.	.	.	.	.	.	.	.	2610	.	.	.	.	.	.	.	.	.	2620	.	.	.	.	.	.	.	.	.	2630	.	.	.	.	.	.	.	.	.	2640	.	.	.	.	.	.	.	.	.	2650	.	.	.	.	.	.	.	.	.	2660
Sequence	G	L	P	Y	W	D	W	T	A	A	F	S	H	L	P	T	L	V	T	D	N	D	N	N	P	F	H	D	G	T	I	E	Y	L	N	V	T	T	T	R	S	P	R	D	L	L	F	N	D	P	E	H	G	S	E	S	F	F	Y	R	Q	V	L	F	A	L	E	Q	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			T	T	S			S	S			G	G	G	T			S	S		G	G	G				B	T	T	T	T	B					B			T	T	T	T				T	T	T														T			S
	.	.	.	.	.	.	.	.	.	2670	.	.	.	.	.	.	.	.	.	2680	.	.	.	.	.	.	.	.	.	2690	.	.	.	.	.	.	.	.	.	2700	.	.	.	.	.	.	.	.	.	2710	.	.	.	.	.	.	.	.	.	2720	.	.	.	.	.	.	.	.	.	2730
Sequence	F	C	K	L	E	V	Q	F	E	I	T	H	N	A	I	H	S	W	T	G	G	H	S	P	Y	G	M	S	T	L	D	F	T	A	Y	D	P	L	F	W	L	H	H	S	N	T	D	R	I	W	A	I	W	Q	A	L	Q	K	Y	R	G	L	P	Y	N	H	A	N	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				B	T	T		S	S	S	T	T		S	S	S	G	G	G	S															T										T			S	S			S	S	S
	.	.	.	.	.	.	.	.	.	2740	.	.	.	.	.	.	.	.	.	2750	.	.	.	.	.	.	.	.	.	2760	.	.	.	.	.	.	.	.	.	2770	.	.	.	.	.	.	.	.	.	2780	.	.	.	.	.	.	.	.	.	2790	.	.	.	.	.	.	.	.	.	2800
Sequence	I	Q	A	M	K	T	P	L	R	P	F	S	D	N	I	N	H	N	P	V	T	K	A	N	S	R	P	V	D	V	F	E	Y	N	R	L	R	Y	Q	Y	D	N	L	V	F	H	G	H	T	I	P	E	L	D	H	M	L	E	E	R	K	K	H	D	R	I	F	A	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	G	G	G	S			T	T	T	S	S	T	T									T		S	G	G	G	T	S						T			B	S				B	T	T	B														T	S
	.	.	.	.	.	.	.	.	.	2810	.	.	.	.	.	.	.	.	.	2820	.	.	.	.	.	.	.	.	.	2830	.	.	.	.	.	.	.	.	.	2840	.	.	.	.	.	.	.	.	.	2850	.	.	.	.	.	.	.	.	.	2860	.	.	.	.	.	.	.	.	.	2870
Sequence	L	L	S	G	I	K	K	S	A	D	V	V	F	E	I	C	E	P	N	H	E	C	V	F	A	G	T	F	A	I	L	G	G	E	L	E	M	P	W	S	F	D	R	L	F	R	Y	D	I	T	K	V	M	Q	Q	Q	H	L	R	H	D	S	D	F	S	F	K	V	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B			S	S											T	T	S														T	T					B		S	S				B		T								T			T	T	S
	.	.	.	.	.	.	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.	.	.	.	2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.	.	.	.	.	.	2930	.	.	.	.	.	.	.	.	.	2940
Sequence	V	G	T	D	D	I	E	L	P	P	G	I	L	K	E	P	T	I	E	F	E	P	A	L	G	D	G	L	K	H	E	D	E	G	H	D	D	R	L	S	H	V	L	I	R	K	E	V	D	L	L	S	L	K	E	A	N	A	I	K	D	A	L	Y	K	L	Q	N	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S		B			T	T	S	S											S				S		S		S		S	S							S					B	S	T	T
	.	.	.	.	.	.	.	.	.	2950	.	.	.	.	.	.	.	.	.	2960	.	.	.	.	.	.	.	.	.	2970	.	.	.	.	.	.	.	.	.	2980	.	.	.	.	.	.	.	.	.	2990	.	.	.	.	.	.	.	.	.	3000	.	.	.	.	.	.	.	.	.	3010
Sequence	S	K	G	G	F	E	E	I	A	G	Y	H	G	Y	P	N	K	C	P	E	K	G	D	D	K	Y	P	C	C	V	H	G	M	P	I	F	P	H	W	R	R	L	H	T	I	Q	M	E	R	A	L	K	N	H	G	S	Q	I	G	I	P	Y	W	N	W	T	K	R	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S									S	S	S						T	T	S						S			S	S	T	T																			T	T		S	S				B			T	T	S			S
	.	.	.	.	.	.	.	.	.	3020	.	.	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080
Sequence	S	I	P	A	F	F	G	D	D	S	N	N	N	P	F	Y	K	Y	H	I	R	A	V	N	Q	Y	T	T	R	D	V	D	V	E	L	F	N	Q	T	K	F	G	E	Y	D	Y	L	Y	Y	S	T	L	Q	V	L	E	E	N	S	F	C	G	F	E	V	Q	Y	E	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	T	S			S	T	T		S	S	S					S	S	S						S						S	S				S			S	S												T			S
	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150
Sequence	H	S	A	V	H	A	W	L	G	G	A	G	K	Y	S	M	S	T	L	E	Y	S	A	Y	D	P	V	F	M	I	H	H	S	S	L	D	R	I	W	I	L	W	Q	Q	L	Q	K	R	R	M	K	L	Y	Y	A	A	D	C	A	G	D	L	M	K	F	P	M	H	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		S		T	T	S	T	T	S	T	T	T	G	G	G	S																								T	T	S		T	T	S		S	S	S					T	S			T	T	T
	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220
Sequence	S	Y	K	S	E	N	E	D	E	F	T	R	V	N	S	V	P	N	I	V	F	D	H	Y	K	F	N	Y	D	Y	D	N	M	R	I	R	G	H	D	I	N	E	L	E	A	I	I	N	E	L	R	N	K	D	R	I	F	A	G	F	V	L	S	G	I	R	I	T	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T		S							T							T		G	G	G	G	T				S				B	T	T	B														T	S										B			S	S
	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290
Sequence	V	K	V	F	I	H	G	T	G	A	T	D	H	E	E	F	A	G	K	F	A	I	L	G	G	E	K	E	M	P	W	A	Y	E	R	L	L	K	L	D	I	T	D	A	V	H	H	L	H	L	K	D	E	E	I	R	F	R	M	E	V	T	A	Y	N	G	V	P	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	T	T	T	B		T	T		B										T	T					B		S	S						T								T			S	S											S	S	S
	.	.	.	.	.	.	.	.	.	3300	.	.	.
Sequence	T	K	L	A	D	P	L	I	A	H	R	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S