PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3j31Q_

Fold library id	PDB Header	Molecule	Title
c3j31Q_	PDB header: virus	Chain: Q: PDB Molecule: a223 penton base;	PDBTitle: life in the extremes: atomic structure of sulfolobus turreted2 icosahedral virus

Links to external resources
Added to library: Sat May 4 08:46:19 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E V F K E V K E K F E R Y K F D V V Y V D R E Y P V S S N N L N V F F E I G E R N S F S G L L I N E G Q A V I D V L L L K K S H E G L S P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T B
T T S S S
S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P G E G T G I Q L S A G Q I L K F Y N V P I A E I I V E Y D P S N V S G V S S N V K L K G T I H P L F E V P S Q I S I E N F Q P T E N Y L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S
T T S
T T
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y S G F G T S L P Q T Y T I P A N G Y L I I S I T N T S T G N I G Q I T L T I G S T T M T F N L Q T G E N K I P V I A G T Q I T N L T L T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S
S T T S
T T

. . . . . . . . . 220

Sequence S S A I L I Y E E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	F	K	E	V	K	E	K	F	E	R	Y	K	F	D	V	V	Y	V	D	R	E	Y	P	V	S	S	N	N	L	N	V	F	F	E	I	G	E	R	N	S	F	S	G	L	L	I	N	E	G	Q	A	V	I	D	V	L	L	L	K	K	S	H	E	G	L	S	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											B	T	T	B									T	T	S											S	S								S			S			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	E	G	T	G	I	Q	L	S	A	G	Q	I	L	K	F	Y	N	V	P	I	A	E	I	I	V	E	Y	D	P	S	N	V	S	G	V	S	S	N	V	K	L	K	G	T	I	H	P	L	F	E	V	P	S	Q	I	S	I	E	N	F	Q	P	T	E	N	Y	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T								T	T											S								T	T	S		T	T																S	S								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	S	G	F	G	T	S	L	P	Q	T	Y	T	I	P	A	N	G	Y	L	I	I	S	I	T	N	T	S	T	G	N	I	G	Q	I	T	L	T	I	G	S	T	T	M	T	F	N	L	Q	T	G	E	N	K	I	P	V	I	A	G	T	Q	I	T	N	L	T	L	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S						S	S										S	S		S										T	T									S									T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	S	S	A	I	L	I	Y	E	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)