PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3j21k_

Fold library id	PDB Header	Molecule	Title
c3j21k_	PDB header: ribosome	Chain: K: PDB Molecule: 50s ribosomal protein l14e;	PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)

Links to external resources
Added to library: Thu Jan 10 01:59:39 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E W K K K E V E E L A N L I K S Y P V V A L V D V S S M P A Y P L S Q M R R L I R E N N G L L R V S R N T L I E L A I K K V A Q E L G K P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S
T T
T T T T
S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L E K L I N Y I E G G A G I L V T T M N P F K L Y K F L Q Q N R Q P A P A K P G A K V P K D V V I P A G P T S L A P G P I V G Q M Q A M G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S
T T S S
S
T T
B
S S
S
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P A R I E R G K V T I Q K D T V V L K A G E E I T P E L A N I L N A L G I Q P L E V G L D L L A V Y E D G I I Y T P D V L A I D E S E Y I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T S B
T
S
S
T T

. .

Sequence M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	W	K	K	K	E	V	E	E	L	A	N	L	I	K	S	Y	P	V	V	A	L	V	D	V	S	S	M	P	A	Y	P	L	S	Q	M	R	R	L	I	R	E	N	N	G	L	L	R	V	S	R	N	T	L	I	E	L	A	I	K	K	V	A	Q	E	L	G	K	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T												S	S								T	T			T	T												T	T											S									S	S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	E	K	L	I	N	Y	I	E	G	G	A	G	I	L	V	T	T	M	N	P	F	K	L	Y	K	F	L	Q	Q	N	R	Q	P	A	P	A	K	P	G	A	K	V	P	K	D	V	V	I	P	A	G	P	T	S	L	A	P	G	P	I	V	G	Q	M	Q	A	M	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	S					T	T							S	S												S								T	T		B		S	S										S			S	S										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	A	R	I	E	R	G	K	V	T	I	Q	K	D	T	V	V	L	K	A	G	E	E	I	T	P	E	L	A	N	I	L	N	A	L	G	I	Q	P	L	E	V	G	L	D	L	L	A	V	Y	E	D	G	I	I	Y	T	P	D	V	L	A	I	D	E	S	E	Y	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T						S							T	T	S	B													T				S			S									T	T
	.	.
Sequence	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)