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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3j21C_

Fold library idPDB HeaderMoleculeTitle
c3j21C_PDB header: ribosomeChain: C: PDB Molecule: 50s ribosomal protein l3p;PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)


Added to library: Wed Jan 9 17:01:31 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGKVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETEVRMLGFAGYKAGMTHILMIDDEPGLTNGKEIFMPV
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S




SS
SSS
S



S
SS


S





SS

S
S
SS
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKPKPKMTFYKLLERRIATLPKNYT
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SSS







S




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S
SSS



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QEMFEQKLGQLEDMIKEGEIVDVRAIVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVG
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Known secondary structure (DSSP) T
TT

SS
SS

S


SSTT
B

 .........220.........230.........240.........250.........260.........270.........280
Sequence EVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRT
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S

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SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPP
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Known secondary structure (DSSP) SS

SSSSS
S



TT
BTTB



S

SS
TT

SS

SSS

 .........360.....
Sequence VQRPQITYVSVESKQ
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S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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