PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3j20J_

Fold library id	PDB Header	Molecule	Title
c3j20J_	PDB header: ribosome	Chain: J: PDB Molecule: 30s ribosomal protein s8e;	PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)

Links to external resources
Added to library: Wed Jan 9 20:15:10 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M A I W Q G R S L K K P S G G R I V L A R K K R K R E L G R E P S N T R V A E Q D K R K I I R T Y G G N R K V R L T A A A Y A N V F D K S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S S B
T T S
B
S
G G G
B
S S
T T S
S B
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . .

Sequence K G R K V R I I R V I E N P A N R Q F A R R N I I T K G A I I E T E I G K A K V T S R P G Q D G V V N A I L L E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B B
S S
S T
S S
B S S S
S
S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	I	W	Q	G	R	S	L	K	K	P	S	G	G	R	I	V	L	A	R	K	K	R	K	R	E	L	G	R	E	P	S	N	T	R	V	A	E	Q	D	K	R	K	I	I	R	T	Y	G	G	N	R	K	V	R	L	T	A	A	A	Y	A	N	V	F	D	K	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				S	S	S	S	B		T	T	S		B					S				G	G	G		B										S	S									T	T	S										S	B						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Sequence	K	G	R	K	V	R	I	I	R	V	I	E	N	P	A	N	R	Q	F	A	R	R	N	I	I	T	K	G	A	I	I	E	T	E	I	G	K	A	K	V	T	S	R	P	G	Q	D	G	V	V	N	A	I	L	L	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B	B							S	S		S						T				S	S					B	S	S	S						S		S	S	S	S