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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3izbC_

Fold library idPDB HeaderMoleculeTitle
c3izbC_PDB header: ribosomeChain: C: PDB Molecule: 40s ribosomal protein rps9 (s4p);PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome


Added to library: Wed Jan 9 15:36:22 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPRAPRTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRL
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Known secondary structure (DSSP)

TTS






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B
 .........80.........90.........100.........110.........120.........130.........140
Sequence FEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQI
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Known secondary structure (DSSP) TSSSSSSSTTTT

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SGGGS
STTS


 .........150.........160.........170.........180.........190......
Sequence VIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRNAARKAEASGEAADEADEADEE
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Known secondary structure (DSSP)




S
SSS

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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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