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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3iz6D_

Fold library idPDB HeaderMoleculeTitle
c3iz6D_PDB header: ribosomeChain: D: PDB Molecule: 40s ribosomal protein s4 (s4e);PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome


Added to library: Sat Dec 11 14:01:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQ
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Known secondary structure (DSSP)
TTSS
SSSTTT

TT


TT



TT


SS


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNVVM
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Known secondary structure (DSSP)
T


SSS

TTS


BS
SS


TT

SSS



STT
 .........150.........160.........170.........180.........190.........200
Sequence VTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGK
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Known secondary structure (DSSP)
SSSS
S


SSS




SS

GGG
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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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