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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3iz5O_ | PDB header: ribosome | Chain: O: PDB Molecule: 60s ribosomal protein l27a (l15p); | PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome |
Added to library: Sat Dec 11 15:15:06 2010 | |
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Links to external resources | |
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Sequence | M | T | T | R | F | K | K | N | R | K | K | R | G | H | V | S | A | G | H | G | R | I | G | K | H | R | K | H | P | G | G | R | G | N | A | G | G | M | H | H | H | R | I | L | F | D | K | Y | H | P | G | Y | F | G | K | V | G | M | R | Y | F | H | R | L | S | N | R | F | H | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | T | T | T | T | S | S | S | S | S | S | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | T | T | S | S | S | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | P | A | V | N | V | E | R | L | W | S | M | V | P | A | E | A | G | A | G | A | G | K | A | P | V | I | D | V | T | Q | F | G | Y | T | K | V | L | G | K | G | M | L | P | P | E | R | P | I | V | V | K | A | K | L | I | S | K | V | A | E | K | K | I | K | A | A | G | G | A | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | G | G | G | T | S | T | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | T | T | ![]() | ![]() | G | G | G | S | S | S | S | S |   | . | . | . | . | ||||||||||||||||||
Sequence | L | L | T | A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) |
Download: | PDB structure | FASTA sequence |
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