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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3iykA_

Fold library idPDB HeaderMoleculeTitle
c3iykA_PDB header: virusChain: A: PDB Molecule: vp5;PDBTitle: bluetongue virus structure reveals a sialic acid binding domain,2 amphipathic helices and a central coiled coil in the outer capsid3 proteins


Added to library: Sat Aug 28 20:40:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VIRSLNRFGKKAKKIYSTIGKAAERFAESEIGSAAIDGLVQGSVHSIIYGESVKQAVLLNEQRNELVNDK
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Known secondary structure (DSSP)
TS

ST
S



TTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKEKFGKENAEIEDEKQFDILNKAVTSYNKILTEEMRRLATALQKEIGERTHAETVMVKEYRDKIDALKN
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Known secondary structure (DSSP) SSS




STTS

SSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AEIAGMTADVLEAAPLIGAGMATAVATKLKKVINALSIDLTRTPKIPSVVSTILEDNALAVSVLSKNRAI
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Known secondary structure (DSSP)

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T




SSTTTS




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S

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SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QNEILPRFKKAMDVMMKFIHVYSAPWVFFFHCISHHHANESFFLGFDLIDLVHYEDLGAAQTAAGRTSNA
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Known secondary structure (DSSP) TS

B
SSSB


SS
GGG

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SSS

STBTTTTS
B
S
 .........290.........300.......
Sequence FGTQMHTRRLSLHYDISSDLRGNAQRI
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Known secondary structure (DSSP) TT
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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