Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3iydE_

Fold library idPDB HeaderMoleculeTitle
c3iydE_PDB header: transcription/dnaChain: E: PDB Molecule: dna-directed rna polymerase subunit omega;PDBTitle: three-dimensional em structure of an intact activator-2 dependent transcription initiation complex


Added to library: Sat Aug 28 21:15:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

SSSSSSS
STTTTT
STT

S
TTS




BTTB





SS
TTS

SS

 .........80.........90
Sequence QQEQEAAELQAVTAIAEGRR
Predicted secondary structure






SS confidence



















Known secondary structure (DSSP)
SSGGGTT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D