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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3iq0B_

Fold library idPDB HeaderMoleculeTitle
c3iq0B_PDB header: transferaseChain: B: PDB Molecule: putative ribokinase ii;PDBTitle: crystal structure of a putative ribokinase ii in complex2 with atp and mg+2 from e.coli


Added to library: Sun Aug 29 00:56:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSKVFTIGEILVEIXASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHR
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Known secondary structure (DSSP)

S

SSTT

SSS



TT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAADGVDIRGISVLPLEATGSAFVTYGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIXGSSLFSFH
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Known secondary structure (DSSP) TT
B
TTTTS








TTSSGGG

TTTT
SSSSTTGGG
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XVDAVKKAVTIVKANGGVISFDPNIRKEXLDIPEXRDALHFVLELTDIYXPSEGEVLLLSPHSTPERAIA
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Known secondary structure (DSSP) TT




GGGGGST
S

BGGGTTTT
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANA
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Known secondary structure (DSSP) T


GGG

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TTTT

 .........290.........300........
Sequence CGALAVTRRGPXEGTSRLXEIETFIQRH
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Known secondary structure (DSSP) TTSSSTTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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