PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3inpA_

Fold library id	PDB Header	Molecule	Title
c3inpA_	PDB header: isomerase	Chain: A: PDB Molecule: d-ribulose-phosphate 3-epimerase;	PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-2 phosphate 3-epimerase from francisella tularensis.

Links to external resources
Added to library: Sun Aug 29 06:31:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H I Q I N P S I L S A D L A R L G D D V K A V L A A G A D N I H F D V M D N H Y V P N L T F G P M V L K A L R D Y G I T A G M D V H L M V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B G G G S
G G G T T
B S S S S S
B
T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P V D A L I E S F A K A G A T S I V F H P E A S E H I D R S L Q L I K S F G I Q A G L A L N P A T G I D C L K Y V E S N I D R V L I M S V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
S
G G G
S
T T T S
T T
S G G G T T T G G G
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P G F Q K F I P A M L D K A K E I S K W I S S T D R D I L L E I D G G V N P Y N I A E I A V C G V N A F V A G S A I F N S D S Y K Q T I D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S
S S
T T T T T T
S T S S

. . . . . . . .

Sequence M R D E L N K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	I	Q	I	N	P	S	I	L	S	A	D	L	A	R	L	G	D	D	V	K	A	V	L	A	A	G	A	D	N	I	H	F	D	V	M	D	N	H	Y	V	P	N	L	T	F	G	P	M	V	L	K	A	L	R	D	Y	G	I	T	A	G	M	D	V	H	L	M	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	G	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B														T			S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	V	D	A	L	I	E	S	F	A	K	A	G	A	T	S	I	V	F	H	P	E	A	S	E	H	I	D	R	S	L	Q	L	I	K	S	F	G	I	Q	A	G	L	A	L	N	P	A	T	G	I	D	C	L	K	Y	V	E	S	N	I	D	R	V	L	I	M	S	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T		S						G	G	G		S											T	T	T	S								T	T			S	G	G	G	T	T	T	G	G	G		S							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	G	F	Q	K	F	I	P	A	M	L	D	K	A	K	E	I	S	K	W	I	S	S	T	D	R	D	I	L	L	E	I	D	G	G	V	N	P	Y	N	I	A	E	I	A	V	C	G	V	N	A	F	V	A	G	S	A	I	F	N	S	D	S	Y	K	Q	T	I	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T																T	S								S	S			T	T	T						T	T	T							S					T	S	S
	.	.	.	.	.	.	.	.
Sequence	M	R	D	E	L	N	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T