PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ihuA_

Fold library id	PDB Header	Molecule	Title
c3ihuA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator, gntr family;	PDBTitle: crystal structure of dna binding protein (yp_298823.1) from2 ralstonia eutropha jmp134 at 1.92 a resolution

Links to external resources
Added to library: Sun Aug 29 00:24:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A S D T V F F G I X S G L E L G T F V P G Q R L V E T D L V A H F G V G R N S V R E A L Q R L A A E G I V D L Q R H R G A V I R R L S L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T T
T
T T S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E T L D V L D V A E R X T G L L A R A A T R G S G N Q P Q V Q A L R A S V Q A L V A A E K A Q D G E T F S N A R R H F Y R T L L E X G D N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence E L R R L F P T I H X P I V H A Q H R L A S L R Q X R L D D Y R R I A T A V L A G E P D A A E A A G A A H V K N V R G A I L D R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T G G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	S	D	T	V	F	F	G	I	X	S	G	L	E	L	G	T	F	V	P	G	Q	R	L	V	E	T	D	L	V	A	H	F	G	V	G	R	N	S	V	R	E	A	L	Q	R	L	A	A	E	G	I	V	D	L	Q	R	H	R	G	A	V	I	R	R	L	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S	S		T	T													T																T	T	S					S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	T	L	D	V	L	D	V	A	E	R	X	T	G	L	L	A	R	A	A	T	R	G	S	G	N	Q	P	Q	V	Q	A	L	R	A	S	V	Q	A	L	V	A	A	E	K	A	Q	D	G	E	T	F	S	N	A	R	R	H	F	Y	R	T	L	L	E	X	G	D	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	T	T																					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	E	L	R	R	L	F	P	T	I	H	X	P	I	V	H	A	Q	H	R	L	A	S	L	R	Q	X	R	L	D	D	Y	R	R	I	A	T	A	V	L	A	G	E	P	D	A	A	E	A	A	G	A	A	H	V	K	N	V	R	G	A	I	L	D	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	G	G	G	G																		T