PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3icaB_

Fold library id	PDB Header	Molecule	Title
c3icaB_	PDB header: ligase	Chain: B: PDB Molecule: phenylalanyl-trna synthetase beta chain;	PDBTitle: the crystal structure of the beta subunit of a phenylalanyl-2 trna synthetase from porphyromonas gingivalis w83

Links to external resources
Added to library: Sat Aug 28 15:42:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N A D R R Y K W Q T V V S E Q L V G A G F N E I L N N S L T A G S Y Y E G L K S H P R E X A V E L X N P L S Q E L N C X R Q T L L F G G L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
G G G G T T
S S S
G G G
B
S S
S
S S S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T L S H N L R R K H L S L Y L F E W G K C Y R F H A A K R T D E T P L A A Y A E D D R L G I W I C G Q R V H P E E P T S V F E L K A V V E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S S S
S B
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence V L C R V G I E T G A Y T L K T A D N D L Y A S A X E V K T R S G K L L G T F G T V S T E L I K R F E I E Q P V Y F A E L L W D A L X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
T T T T
T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	D	R	R	Y	K	W	Q	T	V	V	S	E	Q	L	V	G	A	G	F	N	E	I	L	N	N	S	L	T	A	G	S	Y	Y	E	G	L	K	S	H	P	R	E	X	A	V	E	L	X	N	P	L	S	Q	E	L	N	C	X	R	Q	T	L	L	F	G	G	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T								S				G	G	G	G	T	T		S	S	S		G	G	G			B		S	S		S		S	S	S					S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	S	H	N	L	R	R	K	H	L	S	L	Y	L	F	E	W	G	K	C	Y	R	F	H	A	A	K	R	T	D	E	T	P	L	A	A	Y	A	E	D	D	R	L	G	I	W	I	C	G	Q	R	V	H	P	E	E	P	T	S	V	F	E	L	K	A	V	V	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S																	S	S	S	S	S		S																	B							B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	V	L	C	R	V	G	I	E	T	G	A	Y	T	L	K	T	A	D	N	D	L	Y	A	S	A	X	E	V	K	T	R	S	G	K	L	L	G	T	F	G	T	V	S	T	E	L	I	K	R	F	E	I	E	Q	P	V	Y	F	A	E	L	L	W	D	A	L	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			G	G	G									T	T										T	T																		T	T			S