Fold library entry viewer: c3iayA_

Added to library: Sat Aug 28 16:01:30 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	F	E	R	K	K	L	P	T	D	F	D	P	S	L	Y	D	I	S	F	Q	Q	I	D	A	E	Q	S	V	L	N	G	I	K	D	E	N	T	S	T	V	V	R	F	F	G	V	T	S	E	G	H	S	V	L	C	N	V	T	G	F	K	N	Y	L	Y	V	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T	T																S	S	S		B	T	T	B											T	T	S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	N	S	S	D	A	N	D	Q	E	Q	I	N	K	F	V	H	Y	L	N	E	T	F	D	H	A	I	D	S	I	E	V	V	S	K	Q	S	I	W	G	Y	S	G	D	T	K	L	P	F	W	K	I	Y	V	T	Y	P	H	M	V	N	K	L	R	T	A	F	E	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	G	G	G	G														T	T	T	T	T													S	S			S		S											S	S	T	T												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	L	S	F	N	S	W	F	S	N	G	T	T	T	Y	D	N	I	A	Y	T	L	R	L	M	V	D	C	G	I	V	G	M	S	W	I	T	L	P	K	G	K	Y	S	M	I	E	P	N	N	R	V	S	S	C	Q	L	E	V	S	I	N	Y	R	N	L	I	A	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	S	T	T					B														T			T	T							T	T	S						G	G	G			B			S							T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	E	G	D	W	S	H	T	A	P	L	R	I	M	S	F	D	I	E	C	A	G	R	I	G	V	F	P	E	P	E	Y	D	P	V	I	Q	I	A	N	V	V	S	I	A	G	A	K	K	P	F	I	R	N	V	F	T	L	N	T	C	S	P	I	T	G	S	M	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	G	G	G	S																		T	T	S				T	T	T													T	T		S	S		S								S					B	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	H	A	T	E	E	E	M	L	S	N	W	R	N	F	I	I	K	V	D	P	D	V	I	I	G	Y	N	T	T	N	F	D	I	P	Y	L	L	N	R	A	K	A	L	K	V	N	D	F	P	Y	F	G	R	L	K	T	V	K	Q	E	I	K	E	S	V	F	S	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																		S					S	S	T	T	T	T												T	T		T	T		S			S	S	B	T	T					B								T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	Y	G	T	R	E	T	K	N	V	N	I	D	G	R	L	Q	L	D	L	L	Q	F	I	Q	R	E	Y	K	L	R	S	Y	T	L	N	A	V	S	A	H	F	L	G	E	Q	S	I	I	S	D	L	Q	N	G	D	S	E	T	R	R	R	L	A	V	Y	C	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								B			T	T																	S																							T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	Y	L	P	L	R	L	M	E	K	L	M	A	L	V	N	Y	T	E	M	A	R	V	T	G	V	P	F	S	Y	L	L	A	R	G	Q	Q	I	K	V	V	S	Q	L	F	R	K	C	L	E	I	D	T	V	I	P	N	M	Q	S	Q	A	S	D	D	Q	Y	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																						S																	T	T				B								S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	I	E	P	I	R	G	Y	Y	D	V	P	I	A	T	L	D	F	N	S	L	Y	P	S	I	M	M	A	H	N	L	C	Y	T	T	L	C	N	K	A	T	V	E	R	L	N	L	K	I	D	E	D	Y	V	I	T	P	N	G	D	Y	F	V	T	T	K	R	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B										S								T	T									T	T		S	G	G	G										T	T			B	T	T	T					T	T	S						T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	I	L	P	I	I	L	D	E	L	I	S	A	R	K	R	A	K	K	D	L	R	D	E	K	D	P	F	K	R	D	V	L	N	G	R	Q	L	A	L	K	I	S	A	N	S	V	Y	G	F	T	G	A	T	V	G	K	L	P	C	L	A	I	S	S	S	V	T	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T																													T		S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	R	T	M	I	L	K	T	K	T	A	V	Q	E	K	Y	C	I	K	N	G	Y	K	H	D	A	V	V	V	Y	G	D	T	D	S	V	M	V	K	F	G	T	T	D	L	K	E	A	M	D	L	G	T	E	A	A	K	Y	V	S	T	L	F	K	H	P	I	N	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	G	G	G	T		S	S								B	S	S							S		S																		T	T	S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	E	K	A	Y	F	P	Y	L	L	I	N	K	K	R	Y	A	G	L	F	W	T	N	P	D	K	F	D	K	L	D	Q	K	G	L	A	S	V	R	R	D	S	C	S	L	V	S	I	V	M	N	K	V	L	K	K	I	L	I	E	R	N	V	D	G	A	L	A	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T								S	S	S	S	S								S	S	G	G	G		T	T	S																	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	E	T	I	N	D	I	L	H	N	R	V	D	I	S	K	L	I	I	S	K	T	L	A	P	N	Y	T	N	P	Q	P	H	A	V	L	A	E	R	M	K	R	R	E	G	V	G	P	N	V	G	D	R	V	D	Y	V	I	I	G	G	N	D	K	L	Y	N	R	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S		G	G	G	G								S			S	S																S					T	T	S							B		S	S	S		G	G	G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Sequence	D	P	L	F	V	L	E	N	N	I	Q	V	D	S	R	Y	Y	L	T	N	Q	L	Q	N	P	I	I	S	I	V	A	P	I	I	G	D	K	Q	A	N	G	M	F	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			B									T	T																					T

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PDB structure

FASTA sequence

Hidden Markov model

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