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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3i6dA_

Fold library idPDB HeaderMoleculeTitle
c3i6dA_PDB header: oxidoreductaseChain: A: PDB Molecule: protoporphyrinogen oxidase;PDBTitle: crystal structure of ppo from bacillus subtilis with af


Added to library: Sat Aug 28 21:25:07 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSA
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Known secondary structure (DSSP)


STTTT
S
SSSSS
TT



TT

SS


TT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence PQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEVV
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Known secondary structure (DSSP) TT

TT





SS





SS


SSSS

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ENLIEPLLSGIYAGDIDKLSLMSTFPQFYQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCY
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Known secondary structure (DSSP) TTT
S
TTTBB
GGG

TT
TT

S
S


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISR
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Known secondary structure (DSSP) SSS
S
S
TTTSTTT
SSTT


SS
SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCV
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Known secondary structure (DSSP) TT

S
GGGS
TT


SS

GGGTS
GGGS


S

S
 .........360.........370.........380.........390.........400.........410....
Sequence TRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYLFS
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Known secondary structure (DSSP)
BTTSTT
STTTS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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