PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3i4hX_

Fold library id	PDB Header	Molecule	Title
c3i4hX_	PDB header: hydrolase	Chain: X: PDB Molecule: endoribonuclease;	PDBTitle: crystal structure of cas6 in pyrococcus furiosus

Links to external resources
Added to library: Sun Aug 29 00:56:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H H G S R F L I R L V P E D K D R A F K V P Y N H Q Y Y L Q G L I Y N A I K S S N P K L A T Y L H E V K G P K L F T Y S L F M A E K R E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S
S
S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P K G L P Y F L G Y K K G F F Y F S T C V P E I A E A L V N G L L M N P E V R L W D E R F Y L H E I K V L R E P K K F N G S T F V T L S P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S
T T
S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A V T V V Y D V P P M E K E F Y S I I K D D L Q D K Y V M A Y G D K P P S E F E M E V L I A K P K R F R Q T A W H L V F R A Y G N D D L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
B
B
T T S S S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence V G Y E V G F G E K N S L G F G M V K V E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	G	S	R	F	L	I	R	L	V	P	E	D	K	D	R	A	F	K	V	P	Y	N	H	Q	Y	Y	L	Q	G	L	I	Y	N	A	I	K	S	S	N	P	K	L	A	T	Y	L	H	E	V	K	G	P	K	L	F	T	Y	S	L	F	M	A	E	K	R	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S	S	S						S																														S			S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	K	G	L	P	Y	F	L	G	Y	K	K	G	F	F	Y	F	S	T	C	V	P	E	I	A	E	A	L	V	N	G	L	L	M	N	P	E	V	R	L	W	D	E	R	F	Y	L	H	E	I	K	V	L	R	E	P	K	K	F	N	G	S	T	F	V	T	L	S	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S															S																					T	T															S			T	T						S	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	T	V	V	Y	D	V	P	P	M	E	K	E	F	Y	S	I	I	K	D	D	L	Q	D	K	Y	V	M	A	Y	G	D	K	P	P	S	E	F	E	M	E	V	L	I	A	K	P	K	R	F	R	Q	T	A	W	H	L	V	F	R	A	Y	G	N	D	D	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		B				B			T	T	S	S																		S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	V	G	Y	E	V	G	F	G	E	K	N	S	L	G	F	G	M	V	K	V	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	B		G	G	G	T