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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3i3vC_

Fold library idPDB HeaderMoleculeTitle
c3i3vC_PDB header: transport proteinChain: C: PDB Molecule: probable secreted solute-binding lipoprotein;PDBTitle: crystal structure of probable secreted solute-binding2 lipoprotein from streptomyces coelicolor


Added to library: Sat Aug 28 16:38:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DSDPDTLVVHTQLGTTAPGSPTYLAAVDRFREENPGVKIKNLVNGDDLAQVYETSRLARKEADVVXVNLY
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Known secondary structure (DSSP)

STTS
SSSSTT
TT

STTTT


S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKTLAWTDVGATVDVKPYLDDWGLRGRVLPAALADWTDDEGRVRAFPYFATNWPVAYNRALLDRAGVDAI
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Known secondary structure (DSSP) TTGGGTSS


GGG
TTSB
TB
TTS
B
SB


T

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTTGDQLIAAARKLRAKGIAPVTVGGNDWTGQKLLAQIIQTFLSQDEARHVYSTGDFGVRGARLGIEYFA
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Known secondary structure (DSSP)

BTT


TTSGGG

T
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HLRDAGVFADKAQGLTSDSXTTQFNTEEAAVQSAXSSALAKVPEKVAGHTEVGGWPLADGAAHDGPTVIR
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Known secondary structure (DSSP) TT
B
TTGGG

TTS

TTS
T
B
B
TT
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AYTLIGFWISPNGVRKIEQVEKFLRFXYRPDVVARFVTESGRDXALRTDAVSTGFPLVGAAQRLGSEVSQ
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Known secondary structure (DSSP)

SS
TTS

SB

S


TTST

TTS
 .........360.........370.........380.........390....
Sequence VLLPDVYVPPAAAQPLITATSTSFTRGTSPARVRAALESAYRSV
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Known secondary structure (DSSP)

GGGTS
STT

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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