PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3hzrD_

Fold library id	PDB Header	Molecule	Title
c3hzrD_	PDB header: ligase	Chain: D: PDB Molecule: tryptophanyl-trna synthetase;	PDBTitle: tryptophanyl-trna synthetase homolog from entamoeba2 histolytica

Links to external resources
Added to library: Sat Aug 28 23:54:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P S Q L L Q S F T T R T T D Y N Q L I N S V G I N A I T P Q Q I Q R I E K L S G K A P H H Y L S R G V F L A E K S L D K F L D D V E A K K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
S T
T S
T T S S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T F I F I Q K Y P Q K E V A L E E Y I T L E F A R Y L Q D A F N I Q V I I Q I L D D I K V L N R E A T I N E A S K M S N D L M K Y I L A F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B G G G
T T S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F N E D K T F I Y T D Y Q Y F G K M Y R T I S L V E K A T A Y N V V Q P F F N F E Y S D N I G K L A S P S I M T A S M F S Q S Y S H F F S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T T S
S S S
T T S G G G
T T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence P A R C L V L D S I K N V Q F H S I I D Q I A T T L N F I Q P T V L F H K M V P L L S G V T K F D I P S D H N S I L L S D N A K Q V E R K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
T T
T T
S
T T T S
B T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence N K L A F S G G R N T T E E H K K L G G Q C D I D V S F Q L L N I F S S D N A Q V K D V E E K Y S K G E L L S G E L K K I V S A S M K D F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S T T
G G G
S
T T
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . .

Sequence V A Y D A K K K P I T T A Y L K A Y I S K T K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	S	Q	L	L	Q	S	F	T	T	R	T	T	D	Y	N	Q	L	I	N	S	V	G	I	N	A	I	T	P	Q	Q	I	Q	R	I	E	K	L	S	G	K	A	P	H	H	Y	L	S	R	G	V	F	L	A	E	K	S	L	D	K	F	L	D	D	V	E	A	K	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					S	S	S			S								T																	T	S								T	T	S					S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	F	I	F	I	Q	K	Y	P	Q	K	E	V	A	L	E	E	Y	I	T	L	E	F	A	R	Y	L	Q	D	A	F	N	I	Q	V	I	I	Q	I	L	D	D	I	K	V	L	N	R	E	A	T	I	N	E	A	S	K	M	S	N	D	L	M	K	Y	I	L	A	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		B	G	G	G																														T	T	S																				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	N	E	D	K	T	F	I	Y	T	D	Y	Q	Y	F	G	K	M	Y	R	T	I	S	L	V	E	K	A	T	A	Y	N	V	V	Q	P	F	F	N	F	E	Y	S	D	N	I	G	K	L	A	S	P	S	I	M	T	A	S	M	F	S	Q	S	Y	S	H	F	F	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																														T	T	T	S				S	S	S														T	T	S	G	G	G		T	T	T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	A	R	C	L	V	L	D	S	I	K	N	V	Q	F	H	S	I	I	D	Q	I	A	T	T	L	N	F	I	Q	P	T	V	L	F	H	K	M	V	P	L	L	S	G	V	T	K	F	D	I	P	S	D	H	N	S	I	L	L	S	D	N	A	K	Q	V	E	R	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G															T															T	T		T	T			S				T	T	T	S		B	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	K	L	A	F	S	G	G	R	N	T	T	E	E	H	K	K	L	G	G	Q	C	D	I	D	V	S	F	Q	L	L	N	I	F	S	S	D	N	A	Q	V	K	D	V	E	E	K	Y	S	K	G	E	L	L	S	G	E	L	K	K	I	V	S	A	S	M	K	D	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S						S	S						T	T				G	G	G												S														T	T		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Sequence	V	A	Y	D	A	K	K	K	P	I	T	T	A	Y	L	K	A	Y	I	S	K	T	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T