Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3hzjB_

Fold library idPDB HeaderMoleculeTitle
c3hzjB_PDB header: hydrolase activatorChain: B: PDB Molecule: rab gtpase-activating protein 1-like;PDBTitle: crystal structure of the rabgap domain of the rabgap1l2 protein


Added to library: Sat Aug 28 20:35:44 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSTLVKSGVPEALRAEVWQLLRYRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYS
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
TT




TTS

TTTSSTTSTTT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VYDEDIGYCQGQSFLAAVLLLHXPEEQAFCVLVKIXYDYGLRDLYRNNFEDLHCKFYQLERLXQEQLPDL
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)
SSS
S
TTTTTS
TS
SGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HSHFSDLNLEAHXYASQWFLTLFTAKFPLCXVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGA
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TT

GGGTSTTTTTS

TTT

 .........220.........230.........240.........250......
Sequence LKFFRVQLPKRYRAEENARRLXEQACNIKVPTKKLKKYEKEYQTXR
Predicted secondary structure









SS confidence













































Known secondary structure (DSSP) TTTSSTS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D