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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3humB_

Fold library idPDB HeaderMoleculeTitle
c3humB_PDB header: hydrolase/antibioticsChain: B: PDB Molecule: penicillin-binding protein 4;PDBTitle: crystal structure of penicillin binding protein 4 from2 staphylococcus aureus col in complex with cefotaxime


Added to library: Sat Aug 28 21:46:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TNSDVTPVQAANQYGYAGLSAAYEPTSAVNVSQTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQL
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Known secondary structure (DSSP)


SS
TT
TT

GGG

STT
BSTT


GGGGTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLDDTVTMTNKEYIMSTLPELSNTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNN
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Known secondary structure (DSSP)
TT


TT
TT






TT
S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KAKAIGMKNTHFVNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTH
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Known secondary structure (DSSP) T
TT
B
SSSS
S
GGGS
GGGTT



B
TTT
SS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVTYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGGEKQRNMMG
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Known secondary structure (DSSP) T


S
TTSTTSTT

TTTTTTTSBTTTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence NALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVVEDGKVHADYPREFINKDY
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Known secondary structure (DSSP)
STTSS
TT

GGGSTT
S

BSSTT
 ........
Sequence GPPTVEVH
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Known secondary structure (DSSP)
S
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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