Fold library entry viewer: c3hnfA_

Added to library: Sat Feb 26 08:51:27 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	F	D	K	I	T	S	R	I	Q	K	L	C	Y	G	L	N	M	D	F	V	D	P	A	Q	I	T	M	K	V	I	Q	G	L	Y	S	G	V	T	T	V	E	L	D	T	L	A	A	E	T	A	A	T	L	T	T	K	H	P	D	Y	A	I	L	A	A	R	I	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	G	T	T	S		T	T	T											T	T	S			S	S																	G	G	G	T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	N	L	H	K	E	T	K	K	V	F	S	D	V	M	E	D	L	Y	N	Y	I	N	P	H	N	G	K	H	S	P	M	V	A	K	S	T	L	D	I	V	L	A	N	K	D	R	L	N	S	A	I	I	Y	D	R	D	F	S	Y	N	Y	F	G	F	K	T	L	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		S													B		T	T	T			B			S	S										T	T						T	T			G	G	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	Y	L	L	K	I	N	G	K	V	A	E	R	P	Q	H	M	L	M	R	V	S	V	G	I	H	K	E	D	I	D	A	A	I	E	T	Y	N	L	L	S	E	R	W	F	T	H	A	S	P	T	L	F	N	A	G	T	N	R	P	Q	L	S	S	C	F	L	L	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S		B	S	S	S	S	B																	T	T														T	T	S											T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	D	D	S	I	E	G	I	Y	D	T	L	K	Q	C	A	L	I	S	K	S	A	G	G	I	G	V	A	V	S	C	I	R	A	T	G	S	Y	I	A	G	T	N	G	N	S	N	G	L	V	P	M	L	R	V	Y	N	N	T	A	R	Y	V	D	Q	P	G	A	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																	T									T	T	S			T	T				T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	Y	L	E	P	W	H	L	D	I	F	E	F	L	D	L	K	K	R	D	L	F	F	A	L	W	I	P	D	L	F	M	K	R	V	E	T	N	Q	D	W	S	L	M	C	P	N	E	C	P	G	L	D	E	V	W	G	E	E	F	E	K	L	Y	A	S	Y	E	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	B	T	T					T	T	S																					T	T						B		T	T	T	S	T	T	T	T	S															T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	R	V	R	K	V	V	K	A	Q	Q	L	W	Y	A	I	I	E	S	Q	T	E	T	G	T	P	Y	M	L	Y	K	D	S	C	N	R	K	S	N	Q	Q	N	L	G	T	I	K	C	S	N	L	C	T	E	I	V	E	Y	T	S	K	D	E	V	A	V	C	N	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																				S		S											T		T	T	G	G	G								T	T	S								S	S				B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	L	A	L	N	M	Y	V	T	S	E	H	T	Y	D	F	K	K	L	A	E	V	T	K	V	V	V	R	N	L	N	K	I	I	D	I	N	Y	Y	P	V	P	E	A	C	L	S	N	K	R	H	R	P	I	G	I	G	V	Q	G	L	A	D	A	F	I	L	M	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S	B		T	T	S		B																										S	S																												T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	F	E	S	A	E	A	Q	L	L	N	K	Q	I	F	E	T	I	Y	Y	G	A	L	E	A	S	C	D	L	A	K	E	Q	G	P	Y	E	T	Y	E	G	S	P	V	S	K	G	I	L	Q	Y	D	M	W	N	V	T	P	T	D	L	W	D	W	K	V	L	K	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																																	T	T		T	T	S	T	T	T	T	T							T	T					T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	A	K	Y	G	I	R	N	S	L	L	I	A	P	M	P	T	A	S	T	A	Q	I	L	G	N	N	E	S	I	E	P	Y	T	S	N	I	Y	T	R	R	V	L	S	G	E	F	Q	I	V	N	P	H	L	L	K	D	L	T	E	R	G	L	W	H	E	E	M	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S			B												T	T				T	T				S		S					B		S	S	S	B															T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	I	I	A	C	N	G	S	I	Q	S	I	P	E	I	P	D	D	L	K	Q	L	Y	K	T	V	W	E	I	S	Q	K	T	V	L	K	M	A	A	E	R	G	A	F	I	D	Q	S	Q	S	L	N	I	H	I	A	E	P	N	Y	G	K	L	T	S	M	H	F	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T			T	T		T	T	S								T			G	G	G	S													T	T	S		S	S									S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Sequence	W	K	Q	G	L	K	T	G	M	Y	Y	L	R	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S				S

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PDB structure

FASTA sequence

Hidden Markov model

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