Fold library entry viewer: c3hhdC_

Added to library: Sun Aug 29 04:15:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	G	E	E	V	V	I	A	G	M	S	G	K	L	P	E	S	E	N	L	Q	E	F	W	D	N	L	I	G	G	V	D	M	V	T	D	D	D	R	R	W	K	A	G	L	Y	G	L	P	R	R	S	G	K	L	K	D	L	S	R	F	D	A	S	F	F	G	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												B	T	T	B	S	S										T	T							S	S	S	S	S		T	T	G	G	G			S						S		S					T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	K	Q	A	H	T	M	D	P	Q	L	R	L	L	L	E	V	T	Y	E	A	I	V	D	G	G	I	N	P	D	S	L	R	G	T	H	T	G	V	W	V	G	V	S	G	S	E	T	S	E	A	L	S	R	D	P	E	T	L	V	G	Y	S	M	V	G	C	Q	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S																		T	T			G	G	G	G	T	T	S																		T	S		T	T	T			T							S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	M	A	N	R	L	S	F	F	F	D	F	R	G	P	S	I	A	L	D	T	A	C	S	S	S	L	M	A	L	Q	N	A	Y	Q	A	I	H	S	G	Q	C	P	A	A	I	V	G	G	I	N	V	L	L	K	P	N	T	S	V	Q	F	L	R	L	G	M	L	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T			S								G	G	G															T	T	S		S																							T		B		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	G	T	C	K	A	F	D	T	A	G	N	G	Y	C	R	S	E	G	V	V	A	V	L	L	T	K	K	S	L	A	R	R	V	Y	A	T	I	L	N	A	G	T	N	T	D	G	F	K	E	Q	G	V	T	F	P	S	G	D	I	Q	E	Q	L	I	R	S	L	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S				T	T	B	T	T				B		B	B											G	G	G		S	S		S															T	T		T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	A	G	V	A	P	E	S	F	E	Y	I	E	A	H	G	T	G	T	K	V	G	D	P	Q	E	L	N	G	I	T	R	A	L	C	A	T	R	Q	E	P	L	L	I	G	S	T	K	S	N	M	G	H	P	E	P	A	S	G	L	A	A	L	A	K	V	L	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			G	G	G												T	T														S	S	S		S	S							T						B		G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	H	G	L	W	A	P	N	L	H	F	H	S	P	N	P	E	I	P	A	L	L	D	G	R	L	Q	V	V	D	Q	P	L	P	V	R	G	G	N	V	G	I	N	S	F	G	F	G	G	S	N	V	H	I	I	L	R	P	N	T	Q	P	P	P	A	P	A	P	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	B					S	S			S	B		T	T							T	S						S			B			S										T	T	S																			S	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	L	P	R	L	L	R	A	S	G	R	T	P	E	A	V	Q	K	L	L	E	Q	G	L	R	H	S	Q	D	L	A	F	L	S	M	L	N	D	I	A	A	V	P	A	T	A	M	P	F	R	G	Y	A	V	L	G	G	E	R	G	G	P	E	V	Q	Q	V	P	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S									S	S														T	T	T																T	T	T										S	S	S												S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	R	P	L	W	F	I	C	S	G	M	G	T	Q	W	R	G	M	G	L	S	L	M	R	L	D	R	F	R	D	S	I	L	R	S	D	E	A	V	K	P	F	G	L	K	V	S	Q	L	L	L	S	T	D	E	S	T	F	D	D	I	V	H	S	F	V	S	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T				T	T	T	T	T	T	G	G	G	S															G	G	G	T												T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	Q	I	G	L	I	D	L	L	S	C	M	G	L	R	P	D	G	I	V	G	H	S	L	G	E	V	A	C	G	Y	A	D	G	C	L	S	Q	E	E	A	V	L	A	A	Y	W	R	G	Q	C	I	K	E	A	H	L	P	P	G	A	M	A	A	V	G	L	S	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T				S						T	T										T	S	S																			T	T										S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	C	K	Q	R	C	P	P	G	V	V	P	A	C	H	N	S	K	D	T	V	T	I	S	G	P	Q	A	P	V	F	E	F	V	E	Q	L	R	K	E	G	V	F	A	K	E	V	R	T	G	G	M	A	F	H	S	Y	F	M	E	A	I	A	P	P	L	L	Q	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									T	T																					T	T								S	S	S				S	S	G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	K	V	I	R	E	P	K	P	R	S	A	R	W	L	S	T	S	I	P	E	A	Q	W	H	S	S	L	A	R	T	S	S	A	E	Y	N	V	N	N	L	V	S	P	V	L	F	Q	E	A	L	W	H	V	P	E	H	A	V	V	L	E	I	A	P	H	A	L	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			B			T	T				S	S	S		G	G	G	T	T	S	S	G	G	G	B												S		B							T	T			T	T							S	S	S		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	V	L	K	R	G	L	K	P	S	C	T	I	I	P	L	M	K	K	D	H	R	D	N	L	E	F	F	L	A	G	I	G	R	L	H	L	S	G	I	D	A	N	P	N	A	L	F	P	P	V	E	F	P	A	P	R	G	T	P	L	I	S	P	L	I	K	W	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T									T	T		S																T	T					G	G	G	G	S					S	S			T	T				S	G	G	G
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
Sequence	S	L	A	W	D	V	P	A	A	E	D	F	P	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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