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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3hd4A_ | PDB header: viral protein | Chain: A: PDB Molecule: nucleoprotein; | PDBTitle: mhv nucleocapsid protein ntd |
Added to library: Sun Aug 29 06:00:49 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | P | H | Y | S | W | F | S | G | I | T | Q | F | Q | K | G | K | E | F | Q | F | A | E | G | Q | G | V | P | I | A | N | G | I | P | A | S | E | Q | K | G | Y | W | Y | R | H | N | R | R | S | F | K | T | P | D | G | Q | Q | K | Q | L | L | P | R | W | Y | F | Y | Y | L | G | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | B | ![]() | ![]() | ![]() | S | T | T | T | T | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
Sequence | G | P | H | A | G | A | S | Y | G | D | S | I | E | G | V | F | W | V | A | N | S | Q | A | D | T | N | T | R | S | D | I | V | E | R | D | P | S | S | H | E | A | I | P | T | R | F | A | P | G | T | V | L | P | Q | G | F | Y | V | E | G | S | |||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | S | S | S | T | T | T | B | T | T | T | T | ![]() | ![]() | ![]() | T | T |
Download: | PDB structure | FASTA sequence |
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