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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3h6zA_

Fold library idPDB HeaderMoleculeTitle
c3h6zA_PDB header: transcriptionChain: A: PDB Molecule: polycomb protein sfmbt;PDBTitle: crystal structure of the four mbt repeats of drosophila2 melanogaster sfmbt in complex with peptide rhr (me)k vlr


Added to library: Sun Aug 29 01:16:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAMGSYDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVETSFWVATILEIKGYKALMSYEGFD
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Known secondary structure (DSSP)

S



STSTT

B

GGG
TTSTTTT

TT



BTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSR
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Known secondary structure (DSSP) SGGG
TTTSS
B
TTT

B


GGGGGG
S

TT


S
TTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRLGLNLECVDKDRISQVRLATVTKIVGDRLFLRYFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDY
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Known secondary structure (DSSP) S
TT

TT
TTTTTT
S
TT
TT
TTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence LERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKF
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Known secondary structure (DSSP) TTTTT




TTB

GGGS

SS
TTS






TT
TT
ST
 .........290.........300.........310.........320.........330.........340.........350
Sequence GYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLSDTGAVAAGQH
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Known secondary structure (DSSP) TTTS
TT
TTTT
TT
TT
TTTT





TT

TTT

T

B

GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LFHDIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCV
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Known secondary structure (DSSP) GS









TT

TTSTT
TT
TTS
GGG
TT
TT
TT
 .........430.
Sequence LVNHKLEGPPR
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SS confidence










Known secondary structure (DSSP) T






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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