PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3h4rA_

Fold library id	PDB Header	Molecule	Title
c3h4rA_	PDB header: hydrolase	Chain: A: PDB Molecule: exodeoxyribonuclease 8;	PDBTitle: crystal structure of e. coli rece exonuclease

Links to external resources
Added to library: Sat Aug 28 15:40:07 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P G I S K S Q L D D I A D T P A L Y L W R K N A P V D T T K T K T L D L G T A F H C R V L E L E E F S N R A E E G R K I E L M Y Q S V M A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S
S
T S S T
T T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L G Q W L V E S A G H A E S S I Y W E D P E T G I L C R C R P D K I I P E F H W I M D V K T T A D I Q R F K T A Y Y D Y R Y H V Q D A F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
B S S
T T T
S G G G T S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S D G Y E A Q F G V Q P T F V F L V A S T T I E C G R Y P V E I F M M G E E A K L A G Q Q E Y H R N L R T L S D C L N T D E W P A I K T L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
B T T B
T

. . . . . . . . .

Sequence L P R W A K E Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	I	S	K	S	Q	L	D	D	I	A	D	T	P	A	L	Y	L	W	R	K	N	A	P	V	D	T	T	K	T	K	T	L	D	L	G	T	A	F	H	C	R	V	L	E	L	E	E	F	S	N	R	A	E	E	G	R	K	I	E	L	M	Y	Q	S	V	M	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B																			T	T	S								S			T										S	S					T						T	T										T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	G	Q	W	L	V	E	S	A	G	H	A	E	S	S	I	Y	W	E	D	P	E	T	G	I	L	C	R	C	R	P	D	K	I	I	P	E	F	H	W	I	M	D	V	K	T	T	A	D	I	Q	R	F	K	T	A	Y	Y	D	Y	R	Y	H	V	Q	D	A	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S		B	S	S								T	T	T									S				G	G	G	T									S													T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	G	Y	E	A	Q	F	G	V	Q	P	T	F	V	F	L	V	A	S	T	T	I	E	C	G	R	Y	P	V	E	I	F	M	M	G	E	E	A	K	L	A	G	Q	Q	E	Y	H	R	N	L	R	T	L	S	D	C	L	N	T	D	E	W	P	A	I	K	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S											S	S		B	T	T	B																																	T
	.	.	.	.	.	.	.	.	.
Sequence	L	P	R	W	A	K	E	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T