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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3h4jB_

Fold library idPDB HeaderMoleculeTitle
c3h4jB_PDB header: transferaseChain: B: PDB Molecule: snf1-like protein kinase ssp2;PDBTitle: crystal structure of pombe ampk kdaid fragment


Added to library: Sun Aug 29 02:58:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK
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Known secondary structure (DSSP)

STTTTTTT

TT
STT


TTB

 .........80.........90.........100.........110.........120.........130.........140
Sequence LYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD
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Known secondary structure (DSSP)
SS




S

T





STTT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI
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Known secondary structure (DSSP) T



SS
TBTTTTSBTT


TTSTTTS
GGGS

SGGG
SS
SSB
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADS
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Known secondary structure (DSSP) TT
B



SS




TTS
TTS
SSGGGS

TT
TT

GGGS










 .........290.........300.........310.........320.........330
Sequence RIVSKLGEAMGFSEDYIVEALRSDENNEVKEAYNLLHENQVIQEKLEHHH
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Known secondary structure (DSSP) TT


TTSSS

SSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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