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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3h3lB_ | PDB header: hydrolase | Chain: B: PDB Molecule: putative sugar hydrolase; | PDBTitle: crystal structure of putative sugar hydrolase2 (yp_001304206.1) from parabacteroides distasonis atcc 85033 at 1.59 a resolution |
Added to library: Sat Aug 28 16:56:52 2010 | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | Q | T | Q | A | L | D | S | D | G | I | P | T | G | G | E | W | I | T | X | F | D | G | K | T | L | N | G | W | R | G | Y | C | R | Q | D | V | P | L | G | W | V | V | E | D | G | S | I | T | Y | K | G | S | D | N | F | G | D | L | I | Y | D | K | K | F | K | N | F | V | F | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | S | B | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | T | T | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | S | S | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | I | E | W | K | I | D | K | A | G | N | S | G | I | F | Y | T | A | Q | E | I | E | G | T | P | I | Y | Y | S | S | P | E | Y | Q | L | L | D | N | E | N | X | P | D | A | W | E | G | C | D | G | N | R | Q | A | G | A | V | Y | D | X | I | X | P | D | P | Q | P | V | K | P | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | G | G | G | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | T | T | T | T | S | T | T | S | B | T | T | T | B | S | S | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | G | N | W | N | K | T | R | I | V | V | Y | N | Q | R | V | I | H | Y | X | N | D | V | K | I | L | E | F | Q | F | G | T | P | V | W | R | A | L | V | D | H | S | K | F | S | K | F | S | T | S | P | E | K | C | P | E | A | Y | D | L | X | L | Q | C | G | K | Q | P | G | Y | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | S | T | T | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | B | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Sequence | G | X | Q | D | H | G | Y | G | V | C | F | R | N | I | R | I | K | E | L | |||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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