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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3gvxA_

Fold library idPDB HeaderMoleculeTitle
c3gvxA_PDB header: oxidoreductaseChain: A: PDB Molecule: glycerate dehydrogenase related protein;PDBTitle: crystal structure of glycerate dehydrogenase related2 protein from thermoplasma acidophilum


Added to library: Sat Aug 28 16:50:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDVYVNFPADGHVREIAKTVLDGFDLHWYPDYYDAEAQVIKDRYVLGKRTKXIQAISAGVDHIDVNGIPE
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Known secondary structure (DSSP)


S


TTTS
TTS



SSS




SS


SS

TTS
GGGS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NVVLCSNAGAYSISVAEHAFALLLAHAKNILENNELXKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHL
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Known secondary structure (DSSP) TS

TTTT









TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKAFGXRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGXVNSRLLANARKNLTIVNVAR
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Known secondary structure (DSSP) T

SS


TT
S
SS
S




TTTTT
BSTT

TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADVVSKPDXIGFLKERSDVWYLSDVWWNEPEITETNLRNAILSPHVAGGXSGEIXDIAIQLAFENVRNFF
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Known secondary structure (DSSP) GGGB

TT
S

TTTTS

S


SS

S
SS
BTTB

T
 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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