Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3gviB_

Fold library idPDB HeaderMoleculeTitle
c3gviB_PDB header: oxidoreductaseChain: B: PDB Molecule: malate dehydrogenase;PDBTitle: crystal structure of lactate/malate dehydrogenase from2 brucella melitensis in complex with adp


Added to library: Sat Aug 28 21:59:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEG
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)




STT


SSSST



SSGGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADVVIVTAGVPRKDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMAG
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
S

S





TT


SS


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLDSARFRYFLSEEFNVSVEDVTVFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTR
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) T

GGG


SGGG
GGG
TTTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERII
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TSS



TT

SGGG
TT
 .........290.........300.........310....
Sequence EIDLDKDEKAQFDKSVASVAGLCEACIGIAPSLK
Predicted secondary structure






SS confidence

































Known secondary structure (DSSP)





GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D