PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3gtyS_

Fold library id	PDB Header	Molecule	Title
c3gtyS_	PDB header: chaperone/ribosomal protein	Chain: S: PDB Molecule: 30s ribosomal protein s7;	PDBTitle: promiscuous substrate recognition in folding and assembly2 activities of the trigger factor chaperone

Links to external resources
Added to library: Sat Aug 28 20:46:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M G R Q I P P D P V F G D V L V A K L I N R V M W D G K K T I A Q K I V Y G A F D I I R E K T K K D P L E V F R Q A V E N V K P V L E V R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B T T B T T T T T S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R R V G G A T Y Q V P I E V Q E P R R T S L A L R W I V E A A R A K K G R P M K E K L A E E I I A A Y N N T G T A I K K K E D T H R M A E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T
S S S
T T
S T T

. . . . . . . . .

Sequence N R A F A H Y R W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	R	Q	I	P	P	D	P	V	F	G	D	V	L	V	A	K	L	I	N	R	V	M	W	D	G	K	K	T	I	A	Q	K	I	V	Y	G	A	F	D	I	I	R	E	K	T	K	K	D	P	L	E	V	F	R	Q	A	V	E	N	V	K	P	V	L	E	V	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S														B	T	T	B	T	T	T															T	T	S	S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	R	V	G	G	A	T	Y	Q	V	P	I	E	V	Q	E	P	R	R	T	S	L	A	L	R	W	I	V	E	A	A	R	A	K	K	G	R	P	M	K	E	K	L	A	E	E	I	I	A	A	Y	N	N	T	G	T	A	I	K	K	K	E	D	T	H	R	M	A	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S										T																	T		S	S	S															T	T		S														T	T
	.	.	.	.	.	.	.	.	.
Sequence	N	R	A	F	A	H	Y	R	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G		T	T