PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3grrA_

Fold library id	PDB Header	Molecule	Title
c3grrA_	PDB header: transferase	Chain: A: PDB Molecule: dimethyladenosine transferase;	PDBTitle: crystal structure of the complex between s-adenosyl2 homocysteine and methanocaldococcus jannaschi dim1.

Links to external resources
Added to library: Sat Aug 28 15:59:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q C F L I D K N F V N K A V E S A N L T K D D V V L E I G L G K G I L T E E L A K N A K K V Y V I E I D K S L E P Y A N K L K E L Y N N I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T S S S S
G G G T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I W G D A L K V D L N K L D F N K V V A N L P Y Q I S S P I T F K L I K R G F D L A V L M Y Q Y E F A K R M V A A A G T K D Y G R L S V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S
G G G
S
G G G
S
T T S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V Q S R A D V E I V A K V P P S A F Y P K P K V Y S A I V K I K P N K G K Y H I E N E N F F D D F L R A I F Q H R N K S V R K A L I D S S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S
S S
S
T T T T S B T G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .

Sequence E L N Y N K D E M K K I L E D F L N T N S E I K N L I N E K V F K L S V K D I V N L S N E F Y R F L Q N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T
T T
T S B G G G S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	C	F	L	I	D	K	N	F	V	N	K	A	V	E	S	A	N	L	T	K	D	D	V	V	L	E	I	G	L	G	K	G	I	L	T	E	E	L	A	K	N	A	K	K	V	Y	V	I	E	I	D	K	S	L	E	P	Y	A	N	K	L	K	E	L	Y	N	N	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T			T	T									T	T	S										S	S							S		G	G	G									T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	W	G	D	A	L	K	V	D	L	N	K	L	D	F	N	K	V	V	A	N	L	P	Y	Q	I	S	S	P	I	T	F	K	L	I	K	R	G	F	D	L	A	V	L	M	Y	Q	Y	E	F	A	K	R	M	V	A	A	A	G	T	K	D	Y	G	R	L	S	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	T	S		G	G	G				S								G	G	G														S																		T	T	S	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	Q	S	R	A	D	V	E	I	V	A	K	V	P	P	S	A	F	Y	P	K	P	K	V	Y	S	A	I	V	K	I	K	P	N	K	G	K	Y	H	I	E	N	E	N	F	F	D	D	F	L	R	A	I	F	Q	H	R	N	K	S	V	R	K	A	L	I	D	S	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											G	G	G			S			S	S																	S														T	T	T	T	S	B								T	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Sequence	E	L	N	Y	N	K	D	E	M	K	K	I	L	E	D	F	L	N	T	N	S	E	I	K	N	L	I	N	E	K	V	F	K	L	S	V	K	D	I	V	N	L	S	N	E	F	Y	R	F	L	Q	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T															T	T									T	S	B	G	G	G	S																		T