PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3gozA_

Fold library id	PDB Header	Molecule	Title
c3gozA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: leucine-rich repeat-containing protein;	PDBTitle: crystal structure of the leucine-rich repeat-containing2 protein legl7 from legionella pneumophila. northeast3 structural genomics consortium target lgr148

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Added to library: Sat Aug 28 23:23:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X N Y K L T L H P G S N P V E E F T S I P H G V T S L D L S L N N L Y S I S T V E L I Q A F A N T P A S V T S L N L S G N S L G F K N S D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T S
T T
T T S
G G G S
T
T T
S S
G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L V Q I L A A I P A N V T S L N L S G N F L S Y K S S D E L V K T L A A I P F T I T V L D L G W N D F S S K S S S E F K Q A F S N L P A S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S S
G G G S
T S
T T
S S
G G G S
T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T S L N L R G N D L G I K S S D E L I Q I L A A I P A N V N S L N L R G N N L A S K N C A E L A K F L A S I P A S V T S L D L S A N L L G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G S
T S
T T
T T S
G G G S
T S
T T
T T S
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence K S Y A E L A Y I F S S I P N H V V S L N L C L N C L H G P S L E N L K L L K D S L K H L Q T V Y L D Y D I V K N X S K E Q C K A L G A A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T
S S
T T T T T T T
S T T
T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320

Sequence P N I Q K I I L V D K N G K E I H P S H S I P I S N L I R E L S G K A D V P S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
B
G G G
T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	N	Y	K	L	T	L	H	P	G	S	N	P	V	E	E	F	T	S	I	P	H	G	V	T	S	L	D	L	S	L	N	N	L	Y	S	I	S	T	V	E	L	I	Q	A	F	A	N	T	P	A	S	V	T	S	L	N	L	S	G	N	S	L	G	F	K	N	S	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T									T	S		T	T							T	T	S		G	G	G	S											T			T	T								S	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	Q	I	L	A	A	I	P	A	N	V	T	S	L	N	L	S	G	N	F	L	S	Y	K	S	S	D	E	L	V	K	T	L	A	A	I	P	F	T	I	T	V	L	D	L	G	W	N	D	F	S	S	K	S	S	S	E	F	K	Q	A	F	S	N	L	P	A	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		T	T								S	S		G	G	G	S											T	S		T	T								S	S		G	G	G	S										T	T	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	L	N	L	R	G	N	D	L	G	I	K	S	S	D	E	L	I	Q	I	L	A	A	I	P	A	N	V	N	S	L	N	L	R	G	N	N	L	A	S	K	N	C	A	E	L	A	K	F	L	A	S	I	P	A	S	V	T	S	L	D	L	S	A	N	L	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S		G	G	G	S											T	S		T	T							T	T	S		G	G	G	S											T	S		T	T							T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	S	Y	A	E	L	A	Y	I	F	S	S	I	P	N	H	V	V	S	L	N	L	C	L	N	C	L	H	G	P	S	L	E	N	L	K	L	L	K	D	S	L	K	H	L	Q	T	V	Y	L	D	Y	D	I	V	K	N	X	S	K	E	Q	C	K	A	L	G	A	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S		T	T								S	S													T	T	T	T	T	T	T		S										T	T											T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Sequence	P	N	I	Q	K	I	I	L	V	D	K	N	G	K	E	I	H	P	S	H	S	I	P	I	S	N	L	I	R	E	L	S	G	K	A	D	V	P	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T	S		B			G	G	G													T				T	T	T