PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gf6B_

Fold library id	PDB Header	Molecule	Title
c3gf6B_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized bacterial lipoprotein;	PDBTitle: crystal structure of bacterial lipoprotein of unknown2 function (np_810146.1) from bacteroides thetaiotaomicron3 vpi-5482 at 1.69 a resolution

Links to external resources
Added to library: Sat Aug 28 18:13:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D A I Y Y P V G D V D I E R G G P A L E V G E E D V L V A R S F N E E D Y V L D T I A Q Y P N D P T L G K L T F X I D L K N Q Q K D Q N V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
S B
T T S
S S
T T
S
B S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D F N G V G K S K L T X S L G Y K D G N Y P S E S Q V P I Y T S Q D V T A K Y A V K L R L K G E L L V S G D E W X I D Y V Y A Q L A S L F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B S
S B T T B
G G G
S
S
T T
S S S S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P Y P P A N F P E V F X C K G G X K L G T F D S F R R T C T F D I T Y D R S D L S F S Q L Y F N L F I N L A G Q K R E N R V R L R I D K E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
T T G G G T
T T S S
S S S S
T T

. . . . . . . .

Sequence Y F E L Y E Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	I	Y	Y	P	V	G	D	V	D	I	E	R	G	G	P	A	L	E	V	G	E	E	D	V	L	V	A	R	S	F	N	E	E	D	Y	V	L	D	T	I	A	Q	Y	P	N	D	P	T	L	G	K	L	T	F	X	I	D	L	K	N	Q	Q	K	D	Q	N	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						S						S	B							T	T	S									S	S											T	T					S										B	S				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	F	N	G	V	G	K	S	K	L	T	X	S	L	G	Y	K	D	G	N	Y	P	S	E	S	Q	V	P	I	Y	T	S	Q	D	V	T	A	K	Y	A	V	K	L	R	L	K	G	E	L	L	V	S	G	D	E	W	X	I	D	Y	V	Y	A	Q	L	A	S	L	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	B	S								S	B	T	T	B					G	G	G				S				S		T	T																	S	S	S												S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	Y	P	P	A	N	F	P	E	V	F	X	C	K	G	G	X	K	L	G	T	F	D	S	F	R	R	T	C	T	F	D	I	T	Y	D	R	S	D	L	S	F	S	Q	L	Y	F	N	L	F	I	N	L	A	G	Q	K	R	E	N	R	V	R	L	R	I	D	K	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	G	G	G		T	T							G	G	G	T					T	T	S	S																S													S	S	S										T	T
	.	.	.	.	.	.	.	.
Sequence	Y	F	E	L	Y	E	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)