PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gagB_

Fold library id	PDB Header	Molecule	Title
c3gagB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: putative nadh dehydrogenase, nadph	PDBTitle: crystal structure of nitroreductase-like protein2 (np_720799.1) from streptococcus mutans at 1.70 a3 resolution

Links to external resources
Added to library: Tue Mar 16 14:37:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X X N D Y L N F L D G R V S V R R F D P D A V L P N D L I K D X L E H A S Y A P S G N N F Q P W R V V V V K N K N K Q E D L K K L A A L Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
B
B
T T
T T S
G G G
T T T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q V A T A S A V F L L F G D E N A Y D L T W W Q E F H V Q K G I I T K D E A A A R A E R I R Q Y F D L H P E D K E T Q G L R L D V G L F A X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G
T T S S
G G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence N L X Q V V R V Y G Y D S V P X R G V D F D A I K T Y L D X P N G W E P I L X L P V G K A L Q A G N P H V R K S V A E F A E I I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
S
T
T T
B S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	X	N	D	Y	L	N	F	L	D	G	R	V	S	V	R	R	F	D	P	D	A	V	L	P	N	D	L	I	K	D	X	L	E	H	A	S	Y	A	P	S	G	N	N	F	Q	P	W	R	V	V	V	V	K	N	K	N	K	Q	E	D	L	K	K	L	A	A	L	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T			B				B		T	T																T	T	S			G	G	G																					T	T	T	T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	V	A	T	A	S	A	V	F	L	L	F	G	D	E	N	A	Y	D	L	T	W	W	Q	E	F	H	V	Q	K	G	I	I	T	K	D	E	A	A	A	R	A	E	R	I	R	Q	Y	F	D	L	H	P	E	D	K	E	T	Q	G	L	R	L	D	V	G	L	F	A	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S									G	G	G													T	T	S	S																				G	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	N	L	X	Q	V	V	R	V	Y	G	Y	D	S	V	P	X	R	G	V	D	F	D	A	I	K	T	Y	L	D	X	P	N	G	W	E	P	I	L	X	L	P	V	G	K	A	L	Q	A	G	N	P	H	V	R	K	S	V	A	E	F	A	E	I	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T						B			S										T			T	T												B	S	S