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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3g9qA_ | PDB header: transport protein | Chain: A: PDB Molecule: ferrichrome-binding protein; | PDBTitle: crystal structure of the fhud fold-family bsu3320, a2 periplasmic binding protein component of a fep/fec-like3 ferrichrome abc transporter from bacillus subtilis.4 northeast structural genomics consortium target sr577a |
Added to library: Tue Mar 16 13:10:15 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | I | P | K | H | P | K | R | V | V | V | X | A | D | G | Y | Y | G | Y | F | K | T | L | G | I | N | V | V | G | A | P | E | N | V | F | K | N | P | Y | Y | K | G | K | T | N | G | V | E | N | I | G | D | G | T | S | V | E | K | V | I | D | L | N | P | D | L | I | I | V | W | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | G | G | G | G | T | T | T | T | T | T | T | T | T | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | T | A | D | I | K | K | L | E | K | I | A | P | T | V | A | V | K | Y | D | K | L | D | N | I | E | Q | L | K | E | F | A | K | X | T | G | T | E | D | K | A | E | K | W | L | A | K | W | D | K | K | V | A | A | A | K | T | K | I | K | K | A | V | G | D | K | T | I | S | I | X |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | Q | T | N | G | K | D | I | Y | V | F | G | K | D | F | G | R | G | G | S | I | I | Y | K | D | L | G | L | Q | A | T | K | L | T | K | E | K | A | I | D | Q | G | P | G | Y | T | S | I | S | L | E | K | L | P | D | F | A | G | D | Y | I | F | A | G | P | W | Q | S | G | G | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
Sequence | F | E | S | S | I | W | K | N | L | N | A | V | K | N | G | H | V | Y | K | X | D | P | I | G | F | Y | F | T | D | P | I | S | L | E | G | Q | L | E | F | I | T | E | S | L | T | K | L | E | ||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | ![]() | ![]() | ![]() | ![]() | T | S | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S |
Download: | PDB structure | FASTA sequence |
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