PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3g85A_

Fold library id	PDB Header	Molecule	Title
c3g85A_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator (laci family);	PDBTitle: crystal structure of laci family transcription regulator2 from clostridium acetobutylicum

Links to external resources
Added to library: Tue Mar 16 12:01:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K P T I A L Y W S S D I S V N I I S R F L R G L Q S K L A K Q N Y N Y N V V I C P Y K T D C L H L E K G I S K E N S F D A A I I A N I S N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G T T T
S
T T
G G G
G G G S T T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D L E Y L N K A S L T L P I I L F N R L S N K Y S S V N V D N Y K X G E K A S L L F A K K R Y K S A A A I L T E S L N D A X D N R N K G F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S S
T T
B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E T C H K N G I K I S E N H I I A A E N S I H G G V D A A K K L X K L K N T P K A L F C N S D S I A L G V I S V L N K R Q I S I P D D I E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
G G G
S S T T S S S
S S S T T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270

Sequence V A I G X N D R E Y T E F S T P P V T I V D I P I E E X A G T C I S L V E K L I N R D I E N P T S I L F D G P L I L R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S
T T S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	P	T	I	A	L	Y	W	S	S	D	I	S	V	N	I	I	S	R	F	L	R	G	L	Q	S	K	L	A	K	Q	N	Y	N	Y	N	V	V	I	C	P	Y	K	T	D	C	L	H	L	E	K	G	I	S	K	E	N	S	F	D	A	A	I	I	A	N	I	S	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		G	G	G															T	T	T		S									T	T		G	G	G		G	G	G	S	T	T	T			S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	E	Y	L	N	K	A	S	L	T	L	P	I	I	L	F	N	R	L	S	N	K	Y	S	S	V	N	V	D	N	Y	K	X	G	E	K	A	S	L	L	F	A	K	K	R	Y	K	S	A	A	A	I	L	T	E	S	L	N	D	A	X	D	N	R	N	K	G	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S						S				S	S	S																					T	T			B									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	T	C	H	K	N	G	I	K	I	S	E	N	H	I	I	A	A	E	N	S	I	H	G	G	V	D	A	A	K	K	L	X	K	L	K	N	T	P	K	A	L	F	C	N	S	D	S	I	A	L	G	V	I	S	V	L	N	K	R	Q	I	S	I	P	D	D	I	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		B			G	G	G						S	S												T	T	S	S	S			S					S	S														T	T			T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Sequence	V	A	I	G	X	N	D	R	E	Y	T	E	F	S	T	P	P	V	T	I	V	D	I	P	I	E	E	X	A	G	T	C	I	S	L	V	E	K	L	I	N	R	D	I	E	N	P	T	S	I	L	F	D	G	P	L	I	L	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S							S	S	S	S																									T	T	S	S		S