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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3g1jA_ | PDB header: structural genomics, unknown function | Chain: A: PDB Molecule: integron cassette protein; | PDBTitle: structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass4. |
Added to library: Tue Mar 16 12:55:59 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | V | D | R | D | Y | L | Q | S | E | Y | G | V | L | K | A | G | Q | C | Y | K | V | V | R | S | F | R | D | Y | R | N | I | N | Y | E | R | G | D | V | X | R | F | L | G | S | N | F | V | P | Y | E | S | G | L | S | L | F | F | D | K | N | G | S | E | R | Q | I | X | L | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G | S | B | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Sequence | V | R | P | E | F | Q | X | E | I | A | H | H | L | D | S | Y | F | C | K | L | ||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | T | T | ![]() | ![]() | ![]() | ![]() | T | G | G | G | T | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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