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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3g05B_

Fold library idPDB HeaderMoleculeTitle
c3g05B_PDB header: rna binding proteinChain: B: PDB Molecule: trna uridine 5-carboxymethylaminomethylPDBTitle: crystal structure of n-terminal domain (2-550) of e.coli2 mnmg


Added to library: Sat Aug 28 16:09:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGSFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGG
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Known secondary structure (DSSP)

S

SSS
ST


S
TTTTT


SSSSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGA
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Known secondary structure (DSSP) STTBS


STTS
GGG
B
TT
TT



SSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence VTQMGLKFRAKAVVLTVGTFLDGKIHIGSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGD
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Known secondary structure (DSSP) TTS



S


S



SS







GGGS

SSSB




 .........220.........230.........240.........250.........260.........270.........280
Sequence NPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPSIEDKVMRFADRNQHQIFLEPEGLTSNE
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Known secondary structure (DSSP) SS


SSSS

STT








TT



SSSTTTSS
TTS

S
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence IYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTG
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Known secondary structure (DSSP) S



S
STT
TT





GGGB
TT

BSSSBT
STTTT


 .........360.........370.........380.........390.........400.........410.........420
Sequence YEEAAAQGLLAGLNAARLSDDKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADL
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Known secondary structure (DSSP) TTT






TTT
TSS


TTT
S

GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence RLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRP
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Known secondary structure (DSSP) T


TTTS

TTSTTTTTSSS


S
SST
 .........500.........510.........520....
Sequence EMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEG
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Known secondary structure (DSSP) T

STTS



S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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