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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3g04C_ | PDB header: immune system | Chain: C: PDB Molecule: thyrotropin receptor; | PDBTitle: crystal structure of the tsh receptor in complex with a2 thyroid-stimulating autoantibody |
Added to library: Sat Aug 28 17:57:28 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | C | H | Q | E | E | D | F | R | V | T | C | K | D | I | Q | R | I | P | S | L | P | P | S | T | Q | T | L | K | L | I | E | T | H | L | R | T | I | P | S | H | A | F | S | N | L | P | N | I | S | R | I | Y | V | S | I | D | V | T | L | Q | Q | L | E | S | H | S | F | Y | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | L | S | K | V | T | H | I | E | I | R | N | T | R | N | L | T | Y | I | D | P | D | A | L | K | E | L | P | L | L | K | F | L | G | I | F | N | T | G | L | K | M | F | P | D | L | T | K | V | Y | S | T | D | I | F | F | I | L | E | I | T | D | N | P | Y | M | T | S | I | P | V |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | A | F | Q | G | L | C | N | E | T | L | T | L | K | L | Y | N | N | G | F | T | S | V | Q | G | Y | A | F | N | G | T | K | L | D | A | V | Y | L | N | K | N | K | Y | L | T | V | I | D | K | D | A | F | G | G | V | Y | S | G | P | S | L | L | D | V | S | Q | T | S | V | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | T | T | T | T | T | T | S | B | S | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Sequence | A | L | P | S | K | G | L | E | H | L | K | E | L | I | A | R | N | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | S | S | S | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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