PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fubA_

Fold library id	PDB Header	Molecule	Title
c3fubA_	PDB header: hormone	Chain: A: PDB Molecule: gdnf family receptor alpha-1;	PDBTitle: crystal structure of gdnf-gfralpha1 complex

Links to external resources
Added to library: Sat Aug 28 15:49:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K G N N C L D A A K A C N L D D T C K K Y R S A Y I T P C T T S M S N E V C N R R K C H K A L R Q F F D K V P A K H S Y G M L F C S C R D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A C T E R R R Q T I V P V C S Y E E R E R P N C L S L Q D S C K T N Y I C R S R L A D F F T N C Q P E S R S V S N C L K E N Y A D C L L A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T
S S
B T S S S
S S S S
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence S G L I G T V M T P N Y V D S S S L S V A P W C D C S N S G N D L E D C L K F L N F F K D N T C L K N A I Q A F G N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T
S S S
S
B
T T
G G G T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	G	N	N	C	L	D	A	A	K	A	C	N	L	D	D	T	C	K	K	Y	R	S	A	Y	I	T	P	C	T	T	S	M	S	N	E	V	C	N	R	R	K	C	H	K	A	L	R	Q	F	F	D	K	V	P	A	K	H	S	Y	G	M	L	F	C	S	C	R	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S																		S	S																				S														S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	C	T	E	R	R	R	Q	T	I	V	P	V	C	S	Y	E	E	R	E	R	P	N	C	L	S	L	Q	D	S	C	K	T	N	Y	I	C	R	S	R	L	A	D	F	F	T	N	C	Q	P	E	S	R	S	V	S	N	C	L	K	E	N	Y	A	D	C	L	L	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T						T			S	S			B										T	S														S	S		S	S	S	S			S			G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	S	G	L	I	G	T	V	M	T	P	N	Y	V	D	S	S	S	L	S	V	A	P	W	C	D	C	S	N	S	G	N	D	L	E	D	C	L	K	F	L	N	F	F	K	D	N	T	C	L	K	N	A	I	Q	A	F	G	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S	T	T							S	S	S						S		B		T	T		G	G	G													T												T