PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fteA_

Fold library id	PDB Header	Molecule	Title
c3fteA_	PDB header: transferase/rna	Chain: A: PDB Molecule: dimethyladenosine transferase;	PDBTitle: crystal structure of a. aeolicus ksga in complex with rna

Links to external resources
Added to library: Sat Aug 28 22:32:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V S E G V L K K I A E E L N I E E G N T V V E V G G G T G N L T K V L L Q H P L K K L Y V I E L D R E M V E N L K S I G D E R L E V I N E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S T T S
S
S
T T T G G G G
S S
T T B
B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S K F P F C S L G K E L K V V G N L P Y N V A S L I I E N T V Y N K D C V P L A V F M V Q K E V A E K L Q G K K D T G W L S V F V R T F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G T
S S B
T T T T T G G G
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D V N Y V M T V P P R F F V P P P K V Q S A V I K L V K N E K F P V K D L K N Y K K F L T K I F Q N R R K V L R K K I P E E L L K E A G I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S
S S
S
S
T T T T S B S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence P D A R V E Q L S L E D F F K L Y R L I E D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S B T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	S	E	G	V	L	K	K	I	A	E	E	L	N	I	E	E	G	N	T	V	V	E	V	G	G	G	T	G	N	L	T	K	V	L	L	Q	H	P	L	K	K	L	Y	V	I	E	L	D	R	E	M	V	E	N	L	K	S	I	G	D	E	R	L	E	V	I	N	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T							S			S	S							T	T	S			S							S		T	T	T	G	G	G	G		S	S			T	T	B			B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	K	F	P	F	C	S	L	G	K	E	L	K	V	V	G	N	L	P	Y	N	V	A	S	L	I	I	E	N	T	V	Y	N	K	D	C	V	P	L	A	V	F	M	V	Q	K	E	V	A	E	K	L	Q	G	K	K	D	T	G	W	L	S	V	F	V	R	T	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			G	G	G	T		S	S	B								T	T	T										T	T	G	G	G		S																S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	N	Y	V	M	T	V	P	P	R	F	F	V	P	P	P	K	V	Q	S	A	V	I	K	L	V	K	N	E	K	F	P	V	K	D	L	K	N	Y	K	K	F	L	T	K	I	F	Q	N	R	R	K	V	L	R	K	K	I	P	E	E	L	L	K	E	A	G	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S	S	S			S	S													S			S														T	T	T	T	S	B					S						T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	P	D	A	R	V	E	Q	L	S	L	E	D	F	F	K	L	Y	R	L	I	E	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	B	T	T	S			T											T