Fold library entry viewer: c3fqdA_

Added to library: Tue Mar 16 13:29:19 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	X	G	V	P	A	L	F	R	L	L	S	R	K	F	A	K	V	I	T	P	V	I	E	A	P	T	E	K	L	P	D	G	T	E	I	E	P	D	L	S	L	P	N	P	N	G	V	E	C	D	N	L	Y	L	D	X	N	G	I	V	H	P	C	S	H	P	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G													T	T	S							T	T	S			T	T	S	S									T									S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	P	A	P	E	T	E	D	E	X	X	V	A	V	F	E	Y	T	D	R	I	L	A	X	V	R	P	R	Q	L	L	F	I	A	I	D	G	V	A	P	R	A	K	X	N	Q	Q	R	S	R	R	F	R	S	S	R	E	A	A	L	K	E	E	E	L	Q	A	F	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	A	K	Q	Q	G	I	P	I	D	E	N	A	T	K	K	K	S	W	D	S	N	C	I	T	P	G	T	P	F	X	D	T	L	A	K	S	L	R	Y	Y	I	I	N	K	L	N	S	D	P	C	W	R	N	V	R	F	I	L	S	D	A	S	V	P	G	E	G	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T			B						S						G	G	G	S	S	T	T	S																			T	S		G	G	G	T	T								T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	I	X	E	F	I	R	S	Q	R	V	K	P	E	Y	D	P	N	T	H	H	V	V	Y	G	L	D	A	D	L	I	X	L	G	L	A	T	H	E	P	H	F	R	V	L	R	E	D	V	F	K	E	E	R	L	G	I	K	R	L	D	D	K	P	F	I	W	L	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	S	T	T	S		T	T										T	T								T	T		S	S											T	T	T	T	T			B	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	I	L	R	E	Y	L	E	V	E	L	Y	V	P	N	L	P	F	P	F	D	L	E	R	A	I	D	D	W	V	F	F	I	F	F	V	G	N	D	F	L	P	H	L	P	S	L	D	I	R	D	G	A	V	E	R	L	T	E	I	W	R	A	S	L	P	H	X	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T		S	S															G	G	G	G			S	S	S				T	T			G	G	G	T																	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	L	T	L	D	G	S	V	N	L	A	R	A	E	V	I	L	S	A	V	G	N	Q	E	D	D	I	F	K	R	L	K	Q	Q	E	D	R	R	N	D	T	V	R	L	Y	E	P	G	Y	R	E	R	Y	Y	E	Q	K	F	H	I	S	P	D	E	P	E	K	I	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T																T	T													T	T	T				S		T	T	S	T	T									T	S				T	T		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	V	K	H	Y	V	H	G	L	C	W	V	L	L	Y	Y	Y	Q	G	C	P	S	W	T	W	Y	Y	P	Y	H	Y	A	P	F	A	A	D	F	K	D	L	A	S	I	D	V	K	F	E	L	N	Q	P	F	K	P	Y	E	Q	L	L	G	V	L	P	A	A	S	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T			S		S	S						S	S				G	G	G			S		T	T																							G	G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	L	P	E	K	L	Q	T	L	X	T	D	E	N	S	E	I	I	D	F	Y	P	E	N	F	T	I	D	L	N	G	K	K	F	E	W	Q	G	V	A	L	L	P	F	I	D	E	N	R	L	L	N	A	V	S	K	I	Y	P	Q	L	T	E	E	E	S	K	R	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S											T	T		T	T	G	G	G			S							S	S	S	S		T	T	S	S																		T	T	G	G	G	S							T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	G	S	T	L	L	F	I	S	E	H	H	P	X	F	S	E	L	V	K	Q	L	Y	S	K	K	R	Q	G	K	P	L	K	L	S	G	K	X	A	H	G	L	F	G	K	V	N	T	N	D	S	V	I	P	N	V	S	V	Q	C	P	I	D	V	T	S	A	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	T	T									T	S	S	S		S	S	S						G	G	G	G	T	T			S						T	T	S		S				B			S	S				S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Sequence	Q	K	Y	G	S	I	D	D	N	Q	S	I	S	L	V	F	E	V	P	K	S	H	F	V	H	K	S	X	L	L	R	G	V	K	X	P	N	R	V	L	T	P	E	D	I	N	Q	V	R	A	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			B	S	S														S	S					S			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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