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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3fonA_

Fold library idPDB HeaderMoleculeTitle
c3fonA_PDB header: immune systemChain: A: PDB Molecule: mhc;PDBTitle: crystal structure of the class i mhc molecule h-2kwm7 with a2 single self peptide vndifeai


Added to library: Sun Aug 29 00:49:17 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHSLRYFVTAVSRPGHGKPRYMEVGYVDDTEFVRFDSDAENPRYEPRTPWMEQVEPEYWEGQTQIAKGN
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Known secondary structure (DSSP)



TTSSS
TTTTSSS


SGGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQSSRVDLRTALRYYNQSAGGSHTIQRMRGCEVGSDGRLLRGYQQVAYDGRDYIALNEDLKTWTAADMAA
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Known secondary structure (DSSP) T

SS



TTS
TT
TTSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LITKHKWEQAGAAERDRAYLEGACVEWLRRYLELGNATLLRTDSPKAHVTHHSRPKDKVTLRCWALGFYP
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Known secondary structure (DSSP) TTT

B

TTTBS
 .........220.........230.........240.........250.........260.........270....
Sequence ADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCHVYHEGLPEPLTLRW
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Known secondary structure (DSSP) S

TT

SS




SSS
TT
GGG
TTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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